RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 VASH2Q86V25 355 aa14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 JAMLQ86YT9 394 aa14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 CCDC117Q8IWD4 279 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 ZNF548Q8NEK5 533 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 SEMA4DQ92854 862 aa14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 DUSP23Q9BVJ7 150 aa14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 IRX2Q9BZI1 471 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 DNAI2Q9GZS0 605 aa14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 SYNDIG1Q9H7V2 258 aa14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 EVA1BQ9NVM1 165 aa14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 TSPAN16Q9UKR8 245 aa14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 PPM1HQ9ULR3 514 aa14.14□□□□□ -0.15
SHKBP1-208ENST00000595726 RP1P56715 2156 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 CCDC187A0A096LP49 1063 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 RNF103O00237 685 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 AGRPO00253 132 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 BNIP3LO60238 219 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 MOCS2O96007 188 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 SFTPCP11686 197 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 KRT13P13646 458 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 HGFP14210 728 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 PDGFRAP16234 1089 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 AKT2P31751 481 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 NNMTP40261 264 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 RGS7P49802 495 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 PMS1P54277 932 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 DAOAP59103 153 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 MCCD1P59942 119 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 HNRNPKP61978 463 aaKnown RBP eCLIP14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 FZD2Q14332 565 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 PIP5KL1Q5T9C9 394 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 FAM46CQ5VWP2 391 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 B3GNT8Q7Z7M8 397 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 C14orf80Q86SX3 495 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 LGI2Q8N0V4 545 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 SIX6OS1Q8N1H7 587 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 OR8D1Q8WZ84 308 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 AZIN2Q96A70 460 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 EEF2KMTQ96G04 330 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 FCRL2Q96LA5 508 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 BMFQ96LC9 184 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 PSMG3-AS1Q96PY0 264 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 GTPBP4Q9BZE4 634 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 SLC25A18Q9H1K4 315 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 EPN3Q9H201 632 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 PREBQ9HCU5 417 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 MAN1B1Q9UKM7 699 aa14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 ZFR2Q9UPR6 939 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-208ENST00000595726 TYW5A2RUC4 315 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 CLEC18AA5D8T8 446 aa14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 TRIM49BA6NDI0 452 aa14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 POM121BA6NF01 834 aa14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 PPFIA2O75334 1257 aa14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 ZNF18P17022 549 aa14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 HNRNPA2B1P22626 353 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 INHBCP55103 352 aa14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 UBE2HP62256 183 aa14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 RAP1GAP2Q684P5 730 aa14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 SEL1L3Q68CR1 1132 aa14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 ISM2Q6H9L7 571 aa14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 CLEC18BQ6UXF7 455 aa14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 Q6ZVU0 165 aa14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 ABI3BPQ7Z7G0 1075 aa14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 DSG4Q86SJ6 1040 aa14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 HORMAD1Q86X24 394 aa14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 CIR1Q86X95 450 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 CLEC18CQ8NCF0 446 aa14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 LMX1AQ8TE12 382 aa14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 CLEC4CQ8WTT0 213 aa14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 HTR3CQ8WXA8 447 aa14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 TSG101Q99816 390 aa14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 DDX50Q9BQ39 737 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 PCDHGA4Q9Y5G9 962 aa14.12□□□□□ -0.15
SHKBP1-208ENST00000595726 BLACEA4D250 179 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 PLD2O14939 933 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 CETN3O15182 167 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 SLC16A3O15427 465 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 TCEA3O75764 348 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 CSF2P04141 144 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 EPB41P11171 864 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 CD44P16070 742 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 BMP6P22004 513 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 UGT1A5P35504 534 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 MLLT3P42568 568 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 FOXK1P85037 733 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 LRRC63Q05C16 580 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 C1QBPQ07021 282 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 BST2Q10589 180 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 NR0B2Q15466 257 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 DLG2Q15700 870 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 TPRG1LQ5T0D9 272 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 ANKRD40Q6AI12 368 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 RAB11FIP2Q7L804 512 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 PTAR1Q7Z6K3 402 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 FBXO39Q8N4B4 442 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 TPCN2Q8NHX9 752 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 IFT43Q96FT9 208 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 FOXP3Q9BZS1 431 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 EPB41L5Q9HCM4 733 aa14.11□□□□□ -0.15
SHKBP1-208ENST00000595726 TMEM8AQ9HCN3 771 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms