RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 PRAMEF11O60813 436 aa15.48■□□□□ 0.07
VRK3-207ENST00000594092 FSHRP23945 695 aa15.48■□□□□ 0.07
VRK3-207ENST00000594092 WEE1P30291 646 aa15.48■□□□□ 0.07
VRK3-207ENST00000594092 MAGEA4P43358 317 aa15.48■□□□□ 0.07
VRK3-207ENST00000594092 NUMBP49757 651 aa15.48■□□□□ 0.07
VRK3-207ENST00000594092 MSS51Q4VC12 460 aa15.48■□□□□ 0.07
VRK3-207ENST00000594092 FSCBQ5H9T9 825 aa15.48■□□□□ 0.07
VRK3-207ENST00000594092 TPGS1Q6ZTW0 290 aa15.48■□□□□ 0.07
VRK3-207ENST00000594092 NPAS3Q8IXF0 933 aa15.48■□□□□ 0.07
VRK3-207ENST00000594092 WFDC5Q8TCV5 224 aa15.48■□□□□ 0.07
VRK3-207ENST00000594092 EIF2B3Q9NR50 452 aaKnown RBP15.48■□□□□ 0.07
VRK3-207ENST00000594092 NINJ2Q9NZG7 142 aa15.48■□□□□ 0.07
VRK3-207ENST00000594092 E7ESA3 106 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 EIF3HO15372 352 aaKnown RBP eCLIP15.47■□□□□ 0.07
VRK3-207ENST00000594092 CACNG3O60359 315 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 ACSL3O95573 720 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 HLA-DQB2P05538 268 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 LMAN1P49257 510 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 RENBPP51606 427 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 CDK16Q00536 496 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 ADAM15Q13444 863 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 LRIT3Q3SXY7 679 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 MPP7Q5T2T1 576 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 RNF219Q5W0B1 726 aaPredicted RBP15.47■□□□□ 0.07
VRK3-207ENST00000594092 RNF43Q68DV7 783 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 IL31Q6EBC2 164 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 ZNF783Q6ZMS7 281 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 OTOP3Q7RTS5 596 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 CROCCP2Q86T23 111 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 CAND1Q86VP6 1230 aaKnown RBP15.47■□□□□ 0.07
VRK3-207ENST00000594092 PDIK1LQ8N165 341 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 TEX26Q8N6G2 289 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 PDCD7Q8N8D1 485 aaKnown RBP15.47■□□□□ 0.07
VRK3-207ENST00000594092 PABPC5Q96DU9 382 aaKnown RBP15.47■□□□□ 0.07
VRK3-207ENST00000594092 TTC25Q96NG3 672 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 SERPINB12Q96P63 405 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 SPON2Q9BUD6 331 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 FRMD8Q9BZ67 464 aaPredicted RBP15.47■□□□□ 0.07
VRK3-207ENST00000594092 PDFQ9HBH1 243 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 GLOD4Q9HC38 313 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 LMCD1Q9NZU5 365 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 PRRC2BQ5JSZ5 2229 aaKnown RBP15.47■□□□□ 0.07
VRK3-207ENST00000594092 GOLGA6CA6NDK9 693 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 ALOX15BO15296 676 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 BANF1O75531 89 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 SHBGP04278 402 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 GOLGA6DP0CG33 693 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 SLC10A7Q0GE19 358 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 PDIA2Q13087 525 aaKnown RBP15.47■□□□□ 0.07
VRK3-207ENST00000594092 MTM1Q13496 603 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 CDH18Q13634 790 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 FASTKD3Q14CZ7 662 aaKnown RBP15.47■□□□□ 0.07
VRK3-207ENST00000594092 KYNUQ16719 465 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 KRT71Q3SY84 523 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 MARC1Q5VT66 337 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 LEKR1Q6ZMV7 388 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 ZNF534Q76KX8 674 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 NSMCE1Q8WV22 266 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 ARL8AQ96BM9 186 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 MLPHQ9BV36 600 aaPredicted RBP15.47■□□□□ 0.07
VRK3-207ENST00000594092 ACE2Q9BYF1 805 aaPredicted RBP15.47■□□□□ 0.07
VRK3-207ENST00000594092 KIF9Q9HAQ2 790 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 TMBIM4Q9HC24 238 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 ATP13A1Q9HD20 1204 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 GOLGA6AQ9NYA3 693 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 PLK2Q9NYY3 685 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 TTLL3Q9Y4R7 772 aa15.47■□□□□ 0.07
VRK3-207ENST00000594092 NUP210Q8TEM1 1887 aaPredicted RBP15.46■□□□□ 0.07
VRK3-207ENST00000594092 KDELR3O43731 214 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 AVILO75366 819 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 NEBLO76041 1014 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 HOXB8P17481 243 aaPredicted RBP15.46■□□□□ 0.07
VRK3-207ENST00000594092 GLDCP23378 1020 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 MZF1P28698 734 aaPredicted RBP15.46■□□□□ 0.07
VRK3-207ENST00000594092 ETFBP38117 255 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 GRIA1P42261 906 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 IFNAR2P48551 515 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 OXCT1P55809 520 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 TNK2Q07912 1038 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 CBLBQ13191 982 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 BBS9Q3SYG4 887 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 TTMPQ5BVD1 217 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 HP1BP3Q5SSJ5 553 aaPredicted RBP15.46■□□□□ 0.07
VRK3-207ENST00000594092 FYB2Q5VWT5 728 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 GET4Q7L5D6 327 aaPredicted RBP15.46■□□□□ 0.07
VRK3-207ENST00000594092 MFN1Q8IWA4 741 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 ZBED8Q8IZ13 594 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 CELF5Q8N6W0 485 aaKnown RBP15.46■□□□□ 0.07
VRK3-207ENST00000594092 UHMK1Q8TAS1 419 aaKnown RBP15.46■□□□□ 0.07
VRK3-207ENST00000594092 FGF13Q92913 245 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 RSPRY1Q96DX4 576 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 C9orf72Q96LT7 481 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 ZNF599Q96NL3 588 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 LRRC3BQ96PB8 259 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 FCRL5Q96RD9 977 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 WDR83Q9BRX9 315 aaKnown RBP15.46■□□□□ 0.07
VRK3-207ENST00000594092 MUC3BQ9H195 1237 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 LINC00597Q9H2U6 94 aa15.46■□□□□ 0.07
VRK3-207ENST00000594092 TTYH1Q9H313 450 aaPredicted RBP15.46■□□□□ 0.07
VRK3-207ENST00000594092 CENPHQ9H3R5 247 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms