RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ETFBP38117 255 aa21.2■□□□□ 0.98
PNKP-203ENST00000593946 IFNAR2P48551 515 aa21.2■□□□□ 0.98
PNKP-203ENST00000593946 SLC10A7Q0GE19 358 aa21.2■□□□□ 0.98
PNKP-203ENST00000593946 SLC29A2Q14542 456 aa21.2■□□□□ 0.98
PNKP-203ENST00000593946 KYNUQ16719 465 aa21.2■□□□□ 0.98
PNKP-203ENST00000593946 DENND2CQ68D51 928 aa21.2■□□□□ 0.98
PNKP-203ENST00000593946 KCTD11Q693B1 232 aa21.2■□□□□ 0.98
PNKP-203ENST00000593946 ANKRD54Q6NXT1 300 aa21.2■□□□□ 0.98
PNKP-203ENST00000593946 SYCE2Q6PIF2 218 aa21.2■□□□□ 0.98
PNKP-203ENST00000593946 LRIG3Q6UXM1 1119 aa21.2■□□□□ 0.98
PNKP-203ENST00000593946 ZBED8Q8IZ13 594 aa21.2■□□□□ 0.98
PNKP-203ENST00000593946 CARNMT1Q8N4J0 409 aa21.2■□□□□ 0.98
PNKP-203ENST00000593946 DDI1Q8WTU0 396 aa21.2■□□□□ 0.98
PNKP-203ENST00000593946 PABPC5Q96DU9 382 aaKnown RBP21.2■□□□□ 0.98
PNKP-203ENST00000593946 C9orf72Q96LT7 481 aa21.2■□□□□ 0.98
PNKP-203ENST00000593946 ZNF599Q96NL3 588 aa21.2■□□□□ 0.98
PNKP-203ENST00000593946 ACE2Q9BYF1 805 aaPredicted RBP21.2■□□□□ 0.98
PNKP-203ENST00000593946 GLOD4Q9HC38 313 aa21.2■□□□□ 0.98
PNKP-203ENST00000593946 ERI2A8K979 691 aaKnown RBP21.19■□□□□ 0.98
PNKP-203ENST00000593946 AP2A1O95782 977 aa21.19■□□□□ 0.98
PNKP-203ENST00000593946 LMAN1P49257 510 aa21.19■□□□□ 0.98
PNKP-203ENST00000593946 FSCBQ5H9T9 825 aa21.19■□□□□ 0.98
PNKP-203ENST00000593946 MARC1Q5VT66 337 aa21.19■□□□□ 0.98
PNKP-203ENST00000593946 IL31Q6EBC2 164 aa21.19■□□□□ 0.98
PNKP-203ENST00000593946 OTOP3Q7RTS5 596 aa21.19■□□□□ 0.98
PNKP-203ENST00000593946 NPAS3Q8IXF0 933 aa21.19■□□□□ 0.98
PNKP-203ENST00000593946 WFDC5Q8TCV5 224 aa21.19■□□□□ 0.98
PNKP-203ENST00000593946 NSMCE1Q8WV22 266 aa21.19■□□□□ 0.98
PNKP-203ENST00000593946 FCRL5Q96RD9 977 aa21.19■□□□□ 0.98
PNKP-203ENST00000593946 WDR83Q9BRX9 315 aaKnown RBP21.19■□□□□ 0.98
PNKP-203ENST00000593946 MLPHQ9BV36 600 aaPredicted RBP21.19■□□□□ 0.98
PNKP-203ENST00000593946 KIF9Q9HAQ2 790 aa21.19■□□□□ 0.98
PNKP-203ENST00000593946 XAB2Q9HCS7 855 aaKnown RBP21.19■□□□□ 0.98
PNKP-203ENST00000593946 KDELR3O43731 214 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 AVILO75366 819 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 ACSL3O95573 720 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 FSHRP23945 695 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 FAM193AP78312 1265 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 SARNPP82979 210 aaKnown RBP21.18■□□□□ 0.98
PNKP-203ENST00000593946 MTM1Q13496 603 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 CDH18Q13634 790 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 BBS9Q3SYG4 887 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 TMCO4Q5TGY1 634 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 RNF219Q5W0B1 726 aaPredicted RBP21.18■□□□□ 0.98
PNKP-203ENST00000593946 TPGS1Q6ZTW0 290 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 BHMTQ93088 406 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 OXNAD1Q96HP4 312 aaPredicted RBP21.18■□□□□ 0.98
PNKP-203ENST00000593946 TTC25Q96NG3 672 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 APOL5Q9BWW9 433 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 ATP13A1Q9HD20 1204 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 LMCD1Q9NZU5 365 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 TBC1D14Q9P2M4 693 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 TRIOBPQ9H2D6 2365 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 KIF26AQ9ULI4 1882 aaPredicted RBP21.18■□□□□ 0.98
PNKP-203ENST00000593946 NEBLO76041 1014 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 SUN1O94901 812 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 MLNP12872 115 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 GRIA1P42261 906 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 MMP13P45452 471 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 OXCT1P55809 520 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 HP1BP3Q5SSJ5 553 aaPredicted RBP21.18■□□□□ 0.98
PNKP-203ENST00000593946 FYB2Q5VWT5 728 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 MFN1Q8IWA4 741 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 AGGF1Q8N302 714 aaeCLIP21.18■□□□□ 0.98
PNKP-203ENST00000593946 CELF5Q8N6W0 485 aaKnown RBP21.18■□□□□ 0.98
PNKP-203ENST00000593946 OR2W6PQ8NHA6 318 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 ZBTB9Q96C00 473 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 RUFY1Q96T51 708 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 SPON2Q9BUD6 331 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 MUC3BQ9H195 1237 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 CDH22Q9UJ99 828 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 TTLL3Q9Y4R7 772 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 OR51B4Q9Y5P0 310 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 TEX264Q9Y6I9 313 aa21.18■□□□□ 0.98
PNKP-203ENST00000593946 CYBBP04839 570 aa21.17■□□□□ 0.98
PNKP-203ENST00000593946 HOXB8P17481 243 aaPredicted RBP21.17■□□□□ 0.98
PNKP-203ENST00000593946 GLDCP23378 1020 aa21.17■□□□□ 0.98
PNKP-203ENST00000593946 ADAM15Q13444 863 aa21.17■□□□□ 0.98
PNKP-203ENST00000593946 PRPSAP1Q14558 356 aa21.17■□□□□ 0.98
PNKP-203ENST00000593946 LBRQ14739 615 aaKnown RBP21.17■□□□□ 0.98
PNKP-203ENST00000593946 LRIT3Q3SXY7 679 aa21.17■□□□□ 0.98
PNKP-203ENST00000593946 LRRC8BQ6P9F7 803 aa21.17■□□□□ 0.98
PNKP-203ENST00000593946 KIAA1958Q8N8K9 716 aa21.17■□□□□ 0.98
PNKP-203ENST00000593946 OTUB2Q96DC9 234 aa21.17■□□□□ 0.98
PNKP-203ENST00000593946 ALG14Q96F25 216 aa21.17■□□□□ 0.98
PNKP-203ENST00000593946 PPP1R2P1Q96PQ5 205 aa21.17■□□□□ 0.98
PNKP-203ENST00000593946 SH3GL2Q99962 352 aa21.17■□□□□ 0.98
PNKP-203ENST00000593946 FEM1AQ9BSK4 669 aa21.17■□□□□ 0.98
PNKP-203ENST00000593946 NT5MQ9NPB1 228 aa21.17■□□□□ 0.98
PNKP-203ENST00000593946 PLK2Q9NYY3 685 aa21.17■□□□□ 0.98
PNKP-203ENST00000593946 SHBGP04278 402 aa21.16■□□□□ 0.98
PNKP-203ENST00000593946 MZF1P28698 734 aaPredicted RBP21.16■□□□□ 0.98
PNKP-203ENST00000593946 NUMBP49757 651 aa21.16■□□□□ 0.98
PNKP-203ENST00000593946 EIF3BP55884 814 aaKnown RBP21.16■□□□□ 0.98
PNKP-203ENST00000593946 GPS2Q13227 327 aa21.16■□□□□ 0.98
PNKP-203ENST00000593946 CCDC38Q502W7 563 aa21.16■□□□□ 0.98
PNKP-203ENST00000593946 LEKR1Q6ZMV7 388 aa21.16■□□□□ 0.98
PNKP-203ENST00000593946 ANKMY2Q8IV38 441 aa21.16■□□□□ 0.98
PNKP-203ENST00000593946 FBXO36Q8NEA4 188 aa21.16■□□□□ 0.98
PNKP-203ENST00000593946 PYROXD1Q8WU10 500 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms