RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 RRM1P23921 792 aa16.76■□□□□ 0.27
LIG1-205ENST00000593425 PON1P27169 355 aa16.76■□□□□ 0.27
LIG1-205ENST00000593425 NOS2P35228 1153 aa16.76■□□□□ 0.27
LIG1-205ENST00000593425 GBP6Q6ZN66 633 aa16.76■□□□□ 0.27
LIG1-205ENST00000593425 ZNF683Q8IZ20 524 aa16.76■□□□□ 0.27
LIG1-205ENST00000593425 ATP11CQ8NB49 1132 aa16.76■□□□□ 0.27
LIG1-205ENST00000593425 CHST14Q8NCH0 376 aa16.76■□□□□ 0.27
LIG1-205ENST00000593425 ZNF397Q8NF99 534 aaPredicted RBP16.76■□□□□ 0.27
LIG1-205ENST00000593425 OR2A12Q8NGT7 310 aa16.76■□□□□ 0.27
LIG1-205ENST00000593425 SNIP1Q8TAD8 396 aaKnown RBP16.76■□□□□ 0.27
LIG1-205ENST00000593425 NOX5Q96PH1 765 aa16.76■□□□□ 0.27
LIG1-205ENST00000593425 UBL7Q96S82 380 aaPredicted RBP16.76■□□□□ 0.27
LIG1-205ENST00000593425 NPY6RQ99463 290 aa16.76■□□□□ 0.27
LIG1-205ENST00000593425 TKTL2Q9H0I9 626 aa16.76■□□□□ 0.27
LIG1-205ENST00000593425 PRORYQ9H606 182 aa16.76■□□□□ 0.27
LIG1-205ENST00000593425 SIX2Q9NPC8 291 aa16.76■□□□□ 0.27
LIG1-205ENST00000593425 UCKL1Q9NWZ5 548 aa16.76■□□□□ 0.27
LIG1-205ENST00000593425 ARHGEF38Q9NXL2 777 aa16.76■□□□□ 0.27
LIG1-205ENST00000593425 CLCA2Q9UQC9 943 aa16.76■□□□□ 0.27
LIG1-205ENST00000593425 RAI2Q9Y5P3 530 aa16.76■□□□□ 0.27
LIG1-205ENST00000593425 TDRD6O60522 2096 aaKnown RBP16.75■□□□□ 0.27
LIG1-205ENST00000593425 KPNA3O00505 521 aaPredicted RBP16.75■□□□□ 0.27
LIG1-205ENST00000593425 BRINP1O60477 761 aa16.75■□□□□ 0.27
LIG1-205ENST00000593425 GIMD1P0DJR0 217 aa16.75■□□□□ 0.27
LIG1-205ENST00000593425 GLDCP23378 1020 aa16.75■□□□□ 0.27
LIG1-205ENST00000593425 CHRNA3P32297 505 aa16.75■□□□□ 0.27
LIG1-205ENST00000593425 CLCN1P35523 988 aa16.75■□□□□ 0.27
LIG1-205ENST00000593425 SULT1E1P49888 294 aa16.75■□□□□ 0.27
LIG1-205ENST00000593425 KRT83P78385 493 aa16.75■□□□□ 0.27
LIG1-205ENST00000593425 PTK2Q05397 1052 aa16.75■□□□□ 0.27
LIG1-205ENST00000593425 MTA1Q13330 715 aa16.75■□□□□ 0.27
LIG1-205ENST00000593425 ZNF211Q13398 564 aaPredicted RBP16.75■□□□□ 0.27
LIG1-205ENST00000593425 EXOC3L4Q17RC7 722 aa16.75■□□□□ 0.27
LIG1-205ENST00000593425 ZNF284Q2VY69 593 aa16.75■□□□□ 0.27
LIG1-205ENST00000593425 LINGO4Q6UY18 593 aa16.75■□□□□ 0.27
LIG1-205ENST00000593425 LRRC69Q6ZNQ3 347 aa16.75■□□□□ 0.27
LIG1-205ENST00000593425 SLC47A2Q86VL8 602 aa16.75■□□□□ 0.27
LIG1-205ENST00000593425 DCBLD1Q8N8Z6 715 aa16.75■□□□□ 0.27
LIG1-205ENST00000593425 TMPRSS4Q9NRS4 437 aa16.75■□□□□ 0.27
LIG1-205ENST00000593425 RWDD2AQ9UIY3 292 aa16.75■□□□□ 0.27
LIG1-205ENST00000593425 ZFR2Q9UPR6 939 aaKnown RBP16.75■□□□□ 0.27
LIG1-205ENST00000593425 DOCK4Q8N1I0 1966 aa16.75■□□□□ 0.27
LIG1-205ENST00000593425 A0A0D9SEW6 157 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 FAM170AA1A519 330 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 FFAR2O15552 330 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 DGKAP23743 735 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 CXCR3P49682 368 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 CLDN2P57739 230 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 DAB2P98082 770 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 KCNMA1Q12791 1236 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 SEL1L3Q68CR1 1132 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 C22orf39Q6P5X5 142 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 KDM7AQ6ZMT4 941 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 GCNT7Q6ZNI0 430 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 TFAP2DQ7Z6R9 452 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 HORMAD1Q86X24 394 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 IRF2BP1Q8IU81 584 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 CACTIN-AS1Q8N1I8 211 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 DCAF4L2Q8NA75 395 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 TMIEQ8NEW7 156 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 OR13H1Q8NG92 308 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 OR4C6Q8NH72 309 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 GRIN3AQ8TCU5 1115 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 C2orf49Q9BVC5 232 aaPredicted RBP16.74■□□□□ 0.27
LIG1-205ENST00000593425 CALN1Q9BXU9 219 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 TNKS2Q9H2K2 1166 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 WDCPQ9H6R7 721 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 SYNCQ9H7C4 482 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 KLHL11Q9NVR0 708 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 MPP6Q9NZW5 540 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 DNAJC12Q9UKB3 198 aa16.74■□□□□ 0.27
LIG1-205ENST00000593425 GTPBP10A4D1E9 387 aaKnown RBP16.73■□□□□ 0.27
LIG1-205ENST00000593425 FOXN3O00409 490 aaPredicted RBP16.73■□□□□ 0.27
LIG1-205ENST00000593425 RRP8O43159 456 aaKnown RBP16.73■□□□□ 0.27
LIG1-205ENST00000593425 PIAS2O75928 621 aa16.73■□□□□ 0.27
LIG1-205ENST00000593425 MT-CO3P00414 261 aa16.73■□□□□ 0.27
LIG1-205ENST00000593425 HNRNPA2B1P22626 353 aaKnown RBP16.73■□□□□ 0.27
LIG1-205ENST00000593425 KRT9P35527 623 aa16.73■□□□□ 0.27
LIG1-205ENST00000593425 RNASE9P60153 205 aaKnown RBP16.73■□□□□ 0.27
LIG1-205ENST00000593425 BRMS1LQ5PSV4 323 aa16.73■□□□□ 0.27
LIG1-205ENST00000593425 ARTNQ5T4W7 220 aa16.73■□□□□ 0.27
LIG1-205ENST00000593425 NEK5Q6P3R8 708 aa16.73■□□□□ 0.27
LIG1-205ENST00000593425 TMC6Q7Z403 805 aa16.73■□□□□ 0.27
LIG1-205ENST00000593425 SLC22A18ASQ8N1D0 253 aa16.73■□□□□ 0.27
LIG1-205ENST00000593425 OR7D4Q8NG98 312 aa16.73■□□□□ 0.27
LIG1-205ENST00000593425 BAP1Q92560 729 aa16.73■□□□□ 0.27
LIG1-205ENST00000593425 CCDC114Q96M63 670 aa16.73■□□□□ 0.27
LIG1-205ENST00000593425 FCRL3Q96P31 734 aaPredicted RBP16.73■□□□□ 0.27
LIG1-205ENST00000593425 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.73■□□□□ 0.27
LIG1-205ENST00000593425 FARP1Q9Y4F1 1045 aaPredicted RBP16.73■□□□□ 0.27
LIG1-205ENST00000593425 PCDHB1Q9Y5F3 818 aa16.73■□□□□ 0.27
LIG1-205ENST00000593425 COL27A1Q8IZC6 1860 aaPredicted RBP16.73■□□□□ 0.27
LIG1-205ENST00000593425 KNTC1P50748 2209 aa16.73■□□□□ 0.27
LIG1-205ENST00000593425 DRGXA6NNA5 263 aa16.72■□□□□ 0.27
LIG1-205ENST00000593425 ZNF821O75541 412 aaPredicted RBP16.72■□□□□ 0.27
LIG1-205ENST00000593425 C1QL1O75973 258 aa16.72■□□□□ 0.27
LIG1-205ENST00000593425 PRNPP04156 253 aa16.72■□□□□ 0.27
LIG1-205ENST00000593425 MYF5P13349 255 aa16.72■□□□□ 0.27
LIG1-205ENST00000593425 AKT2P31751 481 aa16.72■□□□□ 0.27
LIG1-205ENST00000593425 CLCN6P51797 869 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms