RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 SLC8A1P32418 973 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 EIF2S3P41091 472 aaKnown RBP13.55□□□□□ -0.24
H3F3B-213ENST00000593254 GRK6P43250 576 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 CSNK1EP49674 416 aaKnown RBP13.55□□□□□ -0.24
H3F3B-213ENST00000593254 AFF3P51826 1226 aaKnown RBP13.55□□□□□ -0.24
H3F3B-213ENST00000593254 NCAPHQ15003 741 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 SYCP1Q15431 976 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 KIF19Q2TAC6 998 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 ALFQ53S48 1182 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 CCDC183Q5T5S1 534 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 ACBD5Q5T8D3 534 aaPredicted RBP13.55□□□□□ -0.24
H3F3B-213ENST00000593254 APTXQ7Z2E3 356 aaKnown RBP13.55□□□□□ -0.24
H3F3B-213ENST00000593254 ZNF605Q86T29 641 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 TMPRSS12Q86WS5 348 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 ANKRD20A12PQ8NF67 263 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 GANCQ8TET4 914 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 C1orf74Q96LT6 269 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 CFAP57Q96MR6 1250 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 SPAG5Q96R06 1193 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 ERGIC2Q96RQ1 377 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 ORAI3Q9BRQ5 295 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 TMPRSS4Q9NRS4 437 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 SLC25A13Q9UJS0 675 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 VPS28Q9UK41 221 aa13.55□□□□□ -0.24
H3F3B-213ENST00000593254 COL12A1Q99715 3063 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 ARID1BQ8NFD5 2236 aaPredicted RBP13.54□□□□□ -0.24
H3F3B-213ENST00000593254 IGLV3-10A0A075B6K4 115 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 DRGXA6NNA5 263 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 TLX3O43711 291 aaPredicted RBP13.54□□□□□ -0.24
H3F3B-213ENST00000593254 ATP9BO43861 1147 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 PCDHGA12O60330 932 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 RNASEH2AO75792 299 aaKnown RBP13.54□□□□□ -0.24
H3F3B-213ENST00000593254 ENDOD1O94919 500 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 FSBPO95073 299 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 ADH1BP00325 375 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 C5AR1P21730 350 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 STAT1P42224 750 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 GRIA4P48058 902 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 PSMD8P48556 350 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 GALCP54803 685 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 ARTNQ5T4W7 220 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 KIAA0895LQ68EN5 471 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 NCEH1Q6PIU2 408 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 DHRS13Q6UX07 377 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 TRIM72Q6ZMU5 477 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 SETD3Q86TU7 594 aaPredicted RBP13.54□□□□□ -0.24
H3F3B-213ENST00000593254 AADATQ8N5Z0 425 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 NEK11Q8NG66 645 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 OMDQ99983 421 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 NEUROG2Q9H2A3 272 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 TM9SF3Q9HD45 589 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 METTL5Q9NRN9 209 aaKnown RBP13.54□□□□□ -0.24
H3F3B-213ENST00000593254 SNX11Q9Y5W9 270 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 SNX10Q9Y5X0 201 aa13.54□□□□□ -0.24
H3F3B-213ENST00000593254 PTPN13Q12923 2485 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 IL1BP01584 269 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 RHOCP08134 193 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 UNGP13051 313 aaPredicted RBP13.53□□□□□ -0.24
H3F3B-213ENST00000593254 GOT1P17174 413 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 DRD3P35462 400 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 UBXN1Q04323 297 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 DLG2Q15700 870 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 LRRC31Q6UY01 552 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 FAM131BQ86XD5 332 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 SH2D3CQ8N5H7 860 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 EMC1Q8N766 993 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 OR2T34Q8NGX1 318 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 SLC30A5Q8TAD4 765 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 FAM131CQ96AQ9 280 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 NXPE2Q96DL1 559 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 HAPLN3Q96S86 360 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 PCDHB18PQ96TA0 734 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 PSMB7Q99436 277 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 C11orf70Q9BRQ4 267 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 MUC3BQ9H195 1237 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 MPP6Q9NZW5 540 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 TMEM63CQ9P1W3 806 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 ZNF212Q9UDV6 495 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 HS3ST2Q9Y278 367 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 ANKRD6Q9Y2G4 727 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 PIEZO2Q9H5I5 2752 aa13.53□□□□□ -0.24
H3F3B-213ENST00000593254 A0A1W2PPC4 97 aa13.52□□□□□ -0.25
H3F3B-213ENST00000593254 FAM47DPA6NHR8 397 aa13.52□□□□□ -0.25
H3F3B-213ENST00000593254 LRRC72A6NJI9 287 aa13.52□□□□□ -0.25
H3F3B-213ENST00000593254 C2CD4BA6NLJ0 364 aa13.52□□□□□ -0.25
H3F3B-213ENST00000593254 MCF2LO15068 1137 aa13.52□□□□□ -0.25
H3F3B-213ENST00000593254 ALOX15BO15296 676 aa13.52□□□□□ -0.25
H3F3B-213ENST00000593254 ATP1A3P13637 1013 aa13.52□□□□□ -0.25
H3F3B-213ENST00000593254 CDK11BP21127 795 aaKnown RBP13.52□□□□□ -0.25
H3F3B-213ENST00000593254 CCT8P50990 548 aa13.52□□□□□ -0.25
H3F3B-213ENST00000593254 METAP1P53582 386 aa13.52□□□□□ -0.25
H3F3B-213ENST00000593254 ADPRHP54922 357 aa13.52□□□□□ -0.25
H3F3B-213ENST00000593254 GSCP56915 257 aaPredicted RBP13.52□□□□□ -0.25
H3F3B-213ENST00000593254 KRT83P78385 493 aa13.52□□□□□ -0.25
H3F3B-213ENST00000593254 ATP11AP98196 1134 aa13.52□□□□□ -0.25
H3F3B-213ENST00000593254 TYRO3Q06418 890 aa13.52□□□□□ -0.25
H3F3B-213ENST00000593254 PTP4A2Q12974 167 aa13.52□□□□□ -0.25
H3F3B-213ENST00000593254 TEAD4Q15561 434 aa13.52□□□□□ -0.25
H3F3B-213ENST00000593254 ACCSLQ4AC99 568 aa13.52□□□□□ -0.25
H3F3B-213ENST00000593254 PCSK4Q6UW60 755 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms