RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 C10orf76Q5T2E6 689 aa5.38□□□□□ -1.55
SMAD4-216ENST00000593223 C10orf25Q5T742 122 aa5.38□□□□□ -1.55
SMAD4-216ENST00000593223 PAPD7Q5XG87 772 aaKnown RBP5.38□□□□□ -1.55
SMAD4-216ENST00000593223 DEF8Q6ZN54 512 aa5.38□□□□□ -1.55
SMAD4-216ENST00000593223 CYB5R4Q7L1T6 521 aa5.38□□□□□ -1.55
SMAD4-216ENST00000593223 ANKS1BQ7Z6G8 1248 aa5.38□□□□□ -1.55
SMAD4-216ENST00000593223 MRPL10Q7Z7H8 261 aaKnown RBP5.38□□□□□ -1.55
SMAD4-216ENST00000593223 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.38□□□□□ -1.55
SMAD4-216ENST00000593223 NKAPQ8N5F7 415 aaKnown RBP5.38□□□□□ -1.55
SMAD4-216ENST00000593223 ENDOVQ8N8Q3 282 aaKnown RBP5.38□□□□□ -1.55
SMAD4-216ENST00000593223 OR52N4Q8NGI2 321 aa5.38□□□□□ -1.55
SMAD4-216ENST00000593223 C16orf52Q8NHV5 167 aa5.38□□□□□ -1.55
SMAD4-216ENST00000593223 SLC2A12Q8TD20 617 aa5.38□□□□□ -1.55
SMAD4-216ENST00000593223 KCNJ9Q92806 393 aa5.38□□□□□ -1.55
SMAD4-216ENST00000593223 TBC1D20Q96BZ9 403 aa5.38□□□□□ -1.55
SMAD4-216ENST00000593223 FBXO2Q9UK22 296 aaPredicted RBP5.38□□□□□ -1.55
SMAD4-216ENST00000593223 BRWD3Q6RI45 1802 aa5.38□□□□□ -1.55
SMAD4-216ENST00000593223 ZMYM2Q9UBW7 1377 aa5.38□□□□□ -1.55
SMAD4-216ENST00000593223 NLRP1Q9C000 1473 aa5.38□□□□□ -1.55
SMAD4-216ENST00000593223 KIF14Q15058 1648 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 SHANK3Q9BYB0 1731 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 MCIDASD6RGH6 385 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 GRM8O00222 908 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 PPEF2O14830 753 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 SEPT4O43236 478 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 MSI1O43347 362 aaKnown RBP5.37□□□□□ -1.55
SMAD4-216ENST00000593223 RNASEH2AO75792 299 aaKnown RBP5.37□□□□□ -1.55
SMAD4-216ENST00000593223 DHRS4L1P0CG22 281 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 ADD2P35612 726 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 CDK18Q07002 472 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 GALNT3Q14435 633 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 PGM5Q15124 567 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 KRT77Q7Z794 578 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 MOGAT3Q86VF5 341 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 TMEM200AQ86VY9 491 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 PAQR4Q8N4S7 273 aaPredicted RBP5.37□□□□□ -1.55
SMAD4-216ENST00000593223 THAP4Q8WY91 577 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 ATP2A3Q93084 1043 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 COQ8BQ96D53 544 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 CLPBQ9H078 707 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 ABHD16BQ9H3Z7 469 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 AAMDCQ9H7C9 122 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 CHODLQ9H9P2 273 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 ELOVL5Q9NYP7 299 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 UTS2RQ9UKP6 389 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 FBXO4Q9UKT5 387 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 CAMSAP2Q08AD1 1489 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 ARHGAP23Q9P227 1491 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 MAST1Q9Y2H9 1570 aa5.37□□□□□ -1.55
SMAD4-216ENST00000593223 CXorf65A6NEN9 183 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 RHODO00212 210 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 PRPF4O43172 522 aaKnown RBP eCLIP5.36□□□□□ -1.55
SMAD4-216ENST00000593223 PIP5K1CO60331 668 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 CYP21A2P08686 494 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 RXRAP19793 462 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 OAZ1P54368 228 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 ADPRHP54922 357 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 ALKBH1Q13686 389 aaKnown RBP5.36□□□□□ -1.55
SMAD4-216ENST00000593223 SIM2Q14190 667 aaPredicted RBP5.36□□□□□ -1.55
SMAD4-216ENST00000593223 DCTN1Q14203 1278 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 SMAD1Q15797 465 aaKnown RBP5.36□□□□□ -1.55
SMAD4-216ENST00000593223 CDC37Q16543 378 aaPredicted RBP5.36□□□□□ -1.55
SMAD4-216ENST00000593223 B4GALNT4Q76KP1 1039 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 MDGA2Q7Z553 956 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 VPS52Q8N1B4 723 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 PTGR2Q8N8N7 351 aaPredicted RBP5.36□□□□□ -1.55
SMAD4-216ENST00000593223 IP6K1Q92551 441 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 SCLT1Q96NL6 688 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 PIMREGQ9BSJ6 248 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 SYT17Q9BSW7 474 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 TRIM31Q9BZY9 425 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 PLEKHA2Q9HB19 425 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 G6PC2Q9NQR9 355 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 ARL15Q9NXU5 204 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 POLG2Q9UHN1 485 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 GTF2A1LQ9UNN4 478 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 RCE1Q9Y256 329 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 ZNF521Q96K83 1311 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 A2MP01023 1474 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 COL3A1P02461 1466 aaPredicted RBP5.36□□□□□ -1.55
SMAD4-216ENST00000593223 ABCC3O15438 1527 aa5.36□□□□□ -1.55
SMAD4-216ENST00000593223 KDM5AP29375 1690 aaKnown RBP5.35□□□□□ -1.55
SMAD4-216ENST00000593223 PZPP20742 1482 aa5.35□□□□□ -1.55
SMAD4-216ENST00000593223 NCOA2Q15596 1464 aa5.35□□□□□ -1.55
SMAD4-216ENST00000593223 FAM90A20PA6NIJ5 464 aa5.35□□□□□ -1.55
SMAD4-216ENST00000593223 FAM155BO75949 473 aa5.35□□□□□ -1.55
SMAD4-216ENST00000593223 TFRCP02786 760 aaKnown RBP5.35□□□□□ -1.55
SMAD4-216ENST00000593223 PRF1P14222 555 aa5.35□□□□□ -1.55
SMAD4-216ENST00000593223 PRPH2P23942 346 aa5.35□□□□□ -1.55
SMAD4-216ENST00000593223 GSTM2P28161 218 aa5.35□□□□□ -1.55
SMAD4-216ENST00000593223 PTGER1P34995 402 aa5.35□□□□□ -1.55
SMAD4-216ENST00000593223 STAT1P42224 750 aa5.35□□□□□ -1.55
SMAD4-216ENST00000593223 MCM2P49736 904 aa5.35□□□□□ -1.55
SMAD4-216ENST00000593223 ARL4CP56559 192 aa5.35□□□□□ -1.55
SMAD4-216ENST00000593223 ACTR2P61160 394 aa5.35□□□□□ -1.55
SMAD4-216ENST00000593223 MTX1Q13505 466 aa5.35□□□□□ -1.55
SMAD4-216ENST00000593223 DLGAP5Q15398 846 aa5.35□□□□□ -1.55
SMAD4-216ENST00000593223 MIDNQ504T8 468 aa5.35□□□□□ -1.55
SMAD4-216ENST00000593223 ISM2Q6H9L7 571 aa5.35□□□□□ -1.55
SMAD4-216ENST00000593223 ZNF425Q6IV72 752 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms