RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 ARHGAP18Q8N392 663 aa20.06■□□□□ 0.8
MBD3-209ENST00000592012 CFHR5Q9BXR6 569 aa20.06■□□□□ 0.8
MBD3-209ENST00000592012 NOL6Q9H6R4 1146 aaKnown RBP20.06■□□□□ 0.8
MBD3-209ENST00000592012 IARS2Q9NSE4 1012 aaKnown RBP20.06■□□□□ 0.8
MBD3-209ENST00000592012 ARL8BQ9NVJ2 186 aa20.06■□□□□ 0.8
MBD3-209ENST00000592012 ZNF358Q9NW07 568 aa20.06■□□□□ 0.8
MBD3-209ENST00000592012 RBM22Q9NW64 420 aaKnown RBP eCLIP20.06■□□□□ 0.81e-7■■■■■ 30.3
MBD3-209ENST00000592012 BPTFQ12830 3046 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 HNRNPCL1O60812 293 aaKnown RBP20.05■□□□□ 0.8
MBD3-209ENST00000592012 HLA-DQB2P05538 268 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 KITP10721 976 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 PTPN4P29074 926 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 SERPINB8P50452 374 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 TBX4P57082 545 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 MPP3Q13368 585 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 TTC7BQ86TV6 843 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 DBF4BQ8NFT6 615 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 IPMKQ8NFU5 416 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 PTCD3Q96EY7 689 aaKnown RBP20.05■□□□□ 0.8
MBD3-209ENST00000592012 TUBB6Q9BUF5 446 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 ELAC1Q9H777 363 aaKnown RBP20.05■□□□□ 0.8
MBD3-209ENST00000592012 MARCOQ9UEW3 520 aaPredicted RBP20.05■□□□□ 0.8
MBD3-209ENST00000592012 HBS1LQ9Y450 684 aaKnown RBP20.05■□□□□ 0.8
MBD3-209ENST00000592012 TET1Q8NFU7 2136 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 GOLGA8TH3BQL2 631 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 ADRA1AP35348 466 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 CSE1LP55060 971 aaKnown RBP20.05■□□□□ 0.8
MBD3-209ENST00000592012 PCID2Q5JVF3 399 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 PKN3Q6P5Z2 889 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 C10orf107Q8IVU9 208 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 REM2Q8IYK8 340 aaPredicted RBP20.05■□□□□ 0.8
MBD3-209ENST00000592012 ABI1Q8IZP0 508 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 PLD6Q8N2A8 252 aaKnown RBP20.05■□□□□ 0.8
MBD3-209ENST00000592012 PPP1R14CQ8TAE6 165 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 HMX1Q9NP08 348 aaPredicted RBP20.05■□□□□ 0.8
MBD3-209ENST00000592012 FNIP2Q9P278 1114 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 COPG2Q9UBF2 871 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 IPO11Q9UI26 975 aaKnown RBP20.05■□□□□ 0.8
MBD3-209ENST00000592012 PCDHB7Q9Y5E2 793 aa20.05■□□□□ 0.8
MBD3-209ENST00000592012 FNDC1Q4ZHG4 1894 aaPredicted RBP20.04■□□□□ 0.8
MBD3-209ENST00000592012 KIF3CO14782 793 aa20.04■□□□□ 0.8
MBD3-209ENST00000592012 ITM2AO43736 263 aa20.04■□□□□ 0.8
MBD3-209ENST00000592012 TBX18O95935 607 aa20.04■□□□□ 0.8
MBD3-209ENST00000592012 ABCG1P45844 678 aa20.04■□□□□ 0.8
MBD3-209ENST00000592012 ALYREFQ86V81 257 aaKnown RBP20.04■□□□□ 0.8
MBD3-209ENST00000592012 CASD1Q96PB1 797 aa20.04■□□□□ 0.8
MBD3-209ENST00000592012 NMUR2Q9GZQ4 415 aa20.04■□□□□ 0.8
MBD3-209ENST00000592012 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.04■□□□□ 0.83e-16■■■□□ 18.7
MBD3-209ENST00000592012 PRDM5Q9NQX1 630 aaPredicted RBP20.04■□□□□ 0.8
MBD3-209ENST00000592012 E2F8A0AVK6 867 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 CCDC78A2IDD5 438 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 OR6C75A6NL08 312 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 FCHO1O14526 889 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 TIMM44O43615 452 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 SOAT2O75908 522 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 ALDH2P05091 517 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 FGFR3P22607 806 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 YWHAQP27348 245 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 GATMP50440 423 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 GEMP55040 296 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 AQP5P55064 265 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 EFEMP1Q12805 493 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 KRT72Q14CN4 511 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 DEFB115Q30KQ5 88 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 MS4A13Q5J8X5 152 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 PDPK2PQ6A1A2 396 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 ZNF280DQ6N043 979 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 UMODL1-AS1Q8N2C9 162 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.03■□□□□ 0.82e-6■□□□□ 10.6
MBD3-209ENST00000592012 NSL1Q96IY1 281 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 CAB39LQ9H9S4 337 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 PEX11BO96011 259 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 SLC8A1P32418 973 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 POU6F1Q14863 301 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 DLG2Q15700 870 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 CCDC153Q494R4 210 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 FAM91A1Q658Y4 838 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 CLEC14AQ86T13 490 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 ACVR1CQ8NER5 493 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 VPS39Q96JC1 886 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 PPP1R2P1Q96PQ5 205 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 FICDQ9BVA6 458 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 TLE6Q9H808 572 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 CREBZFQ9NS37 354 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 MARCH5Q9NX47 278 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 CLIC5Q9NZA1 410 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 SLC27A5Q9Y2P5 690 aa20.03■□□□□ 0.8
MBD3-209ENST00000592012 A0A096LPK6 155 aa20.02■□□□□ 0.8
MBD3-209ENST00000592012 LYPLA1O75608 230 aaPredicted RBP20.02■□□□□ 0.8
MBD3-209ENST00000592012 MPOP05164 745 aa20.02■□□□□ 0.8
MBD3-209ENST00000592012 SLC1A6P48664 564 aa20.02■□□□□ 0.8
MBD3-209ENST00000592012 ARPP19P56211 112 aa20.02■□□□□ 0.8
MBD3-209ENST00000592012 RSPO2Q6UXX9 243 aaPredicted RBP20.02■□□□□ 0.8
MBD3-209ENST00000592012 RANBP10Q6VN20 620 aa20.02■□□□□ 0.8
MBD3-209ENST00000592012 LONP2Q86WA8 852 aa20.02■□□□□ 0.8
MBD3-209ENST00000592012 CCDC117Q8IWD4 279 aaPredicted RBP20.02■□□□□ 0.8
MBD3-209ENST00000592012 AGAP11Q8TF27 550 aa20.02■□□□□ 0.8
MBD3-209ENST00000592012 MRGPRX2Q96LB1 330 aa20.02■□□□□ 0.8
MBD3-209ENST00000592012 CRISPLD1Q9H336 500 aa20.02■□□□□ 0.8
MBD3-209ENST00000592012 GPBP1L1Q9HC44 474 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms