RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 BOLA3Q53S33 107 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 MANEALQ5VSG8 457 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 PRR23CQ6ZRP0 262 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 Q6ZVU0 165 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 RABEPKQ7Z6M1 372 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 RYBPQ8N488 228 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-227ENST00000591849 HDDC3Q8N4P3 179 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 SH2D3CQ8N5H7 860 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 RTL3Q8N8U3 475 aaKnown RBP10.3□□□□□ -0.76
BRCA1-227ENST00000591849 CEP76Q8TAP6 659 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 ZNF564Q8TBZ8 553 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-227ENST00000591849 HSPH1Q92598 858 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 ARHGEF2Q92974 986 aaKnown RBP10.3□□□□□ -0.76
BRCA1-227ENST00000591849 RMDN1Q96DB5 314 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 ARHGEF26Q96DR7 871 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 MYO19Q96H55 970 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 BTBD6Q96KE9 485 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 FAM129BQ96TA1 746 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 PSMB7Q99436 277 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 EIF3CQ99613 913 aaKnown RBP10.3□□□□□ -0.76
BRCA1-227ENST00000591849 CHP1Q99653 195 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 SNRNP25Q9BV90 132 aaKnown RBP10.3□□□□□ -0.76
BRCA1-227ENST00000591849 SGK2Q9HBY8 427 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 CD93Q9NPY3 652 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 LCMT1Q9UIC8 334 aa10.3□□□□□ -0.76
BRCA1-227ENST00000591849 CDV3Q9UKY7 258 aaKnown RBP10.3□□□□□ -0.76
BRCA1-227ENST00000591849 ATXN2Q99700 1313 aaKnown RBP10.3□□□□□ -0.76
BRCA1-227ENST00000591849 KIAA1549LQ6ZVL6 1849 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-227ENST00000591849 A0A1W2PP55 124 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 LRRC72A6NJI9 287 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 GOLGA6L6A8MZA4 724 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 K7ERQ8 282 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 LRCH4O75427 683 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 FSBPO95073 299 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 SEMA4FO95754 770 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 MT-CO1P00395 513 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 GLDCP23378 1020 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 GJC1P36383 396 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 ACVRL1P37023 503 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 ZNF135P52742 658 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-227ENST00000591849 ATXN3P54252 364 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-227ENST00000591849 YBEYP58557 167 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-227ENST00000591849 ZNF252P-AS1Q0IIN9 211 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 SPA17Q15506 151 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 DUOXA1Q1HG43 343 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 RSPO4Q2I0M5 234 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-227ENST00000591849 POM121L1PQ3SYA9 428 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 TRIM61Q5EBN2 209 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 DCAF12L1Q5VU92 463 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-227ENST00000591849 LEKR1Q6ZMV7 388 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 USP30Q70CQ3 517 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 NLRP14Q86W24 1093 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 PSTKQ8IV42 348 aaKnown RBP10.29□□□□□ -0.76
BRCA1-227ENST00000591849 CADM4Q8NFZ8 388 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 OR14C36Q8NHC7 312 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 FRS2Q8WU20 508 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 ZNF419Q96HQ0 510 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-227ENST00000591849 KCTD15Q96SI1 283 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-227ENST00000591849 NEUROG2Q9H2A3 272 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 TNKS2Q9H2K2 1166 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 LUC7LQ9NQ29 371 aaKnown RBP10.29□□□□□ -0.76
BRCA1-227ENST00000591849 SPTLC3Q9NUV7 552 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 UVRAGQ9P2Y5 699 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 SUSD2Q9UGT4 822 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 HS3ST2Q9Y278 367 aa10.29□□□□□ -0.76
BRCA1-227ENST00000591849 TBC1D3DA0A087WVF3 549 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 TBC1D3IA0A087WXS9 549 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 TBC1D3EA0A087X179 549 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 TBC1D3KA0A087X1G2 549 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 TBC1D3FA6NER0 549 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-227ENST00000591849 ZSCAN5CA6NGD5 496 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-227ENST00000591849 ARHGAP42A6NI28 874 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 METTL12A8MUP2 240 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 TBC1D3LB9A6J9 549 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 RASA4BC9J798 803 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 KPNA3O00505 521 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-227ENST00000591849 MCF2LO15068 1137 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 ALOX15BO15296 676 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 RASA4O43374 803 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 KDELR3O43731 214 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 IPO7O95373 1038 aaKnown RBP10.28□□□□□ -0.76
BRCA1-227ENST00000591849 IGLV3-19P01714 112 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 PRNPP04156 253 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 TMEM253P0C7T8 217 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 TBC1D3HP0C7X1 549 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 GOT1P17174 413 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 MAOBP27338 520 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 CHRNA3P32297 505 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 ACSL1P33121 698 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 CYLC1P35663 651 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-227ENST00000591849 MAGEA1P43355 309 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 SERPINH1P50454 418 aaKnown RBP10.28□□□□□ -0.76
BRCA1-227ENST00000591849 TBX2Q13207 712 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-227ENST00000591849 MESDQ14696 234 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 CA9Q16790 459 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 SMTNL2Q2TAL5 461 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 PARP15Q460N3 678 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 ODF2Q5BJF6 829 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms