RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 TMEM74BQ9NUR3 256 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 WSB2Q9NYS7 404 aaPredicted RBP11.78□□□□□ -0.52
VMP1-211ENST00000591315 GMEB2Q9UKD1 530 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 HS3ST2Q9Y278 367 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 FCF1Q9Y324 198 aaKnown RBP11.78□□□□□ -0.52
VMP1-211ENST00000591315 HYOU1Q9Y4L1 999 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 SLCO1B1Q9Y6L6 691 aa11.78□□□□□ -0.52
VMP1-211ENST00000591315 CACNA1EQ15878 2313 aa11.77□□□□□ -0.52
VMP1-211ENST00000591315 BCLAF3A2AJT9 711 aaKnown RBP11.77□□□□□ -0.53
VMP1-211ENST00000591315 TARSL2A2RTX5 802 aaKnown RBP11.77□□□□□ -0.53
VMP1-211ENST00000591315 RCCD1A6NED2 376 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 WASH4PA8MWX3 477 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 RASA4BC9J798 803 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 RASA4O43374 803 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 ZNF217O75362 1048 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 RHOBTB1O94844 696 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 CTSLP07711 333 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 ERCC2P18074 760 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 ITPKAP23677 461 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 CD6P30203 668 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 SLC8A1P32418 973 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 MAGEA1P43355 309 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 AIF1P55008 147 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 KRT83P78385 493 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 DPYSQ14117 519 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 MESDQ14696 234 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 POLD3Q15054 466 aaPredicted RBP11.77□□□□□ -0.53
VMP1-211ENST00000591315 E2F5Q15329 346 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 CST6Q15828 149 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 ZNF776Q68DI1 518 aaPredicted RBP11.77□□□□□ -0.53
VMP1-211ENST00000591315 C22orf39Q6P5X5 142 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 RAD9BQ6WBX8 426 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 ZNF783Q6ZMS7 281 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 ARHGAP36Q6ZRI8 547 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 RFX8Q6ZV50 586 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 LPCAT2Q7L5N7 544 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 METTL3Q86U44 580 aaKnown RBP11.77□□□□□ -0.53
VMP1-211ENST00000591315 ARHGAP12Q8IWW6 846 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 OR2A12Q8NGT7 310 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 PIGKQ92643 395 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 HSPA12BQ96MM6 686 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 PANX2Q96RD6 677 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 SLC39A8Q9C0K1 460 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 PABPC3Q9H361 631 aaKnown RBP11.77□□□□□ -0.53
VMP1-211ENST00000591315 GOLPH3Q9H4A6 298 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 C6orf106Q9H6K1 298 aaPredicted RBP11.77□□□□□ -0.53
VMP1-211ENST00000591315 LRRC19Q9H756 370 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 PCDH18Q9HCL0 1135 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 FSCN3Q9NQT6 498 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.77□□□□□ -0.53
VMP1-211ENST00000591315 UVRAGQ9P2Y5 699 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 REXO2Q9Y3B8 237 aaKnown RBP11.77□□□□□ -0.53
VMP1-211ENST00000591315 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.77□□□□□ -0.53
VMP1-211ENST00000591315 ADAMTS9Q9P2N4 1935 aa11.77□□□□□ -0.53
VMP1-211ENST00000591315 A0A0U1RQJ8 604 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 A0A1W2PP55 124 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 J3KR12 359 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 KDELR3O43731 214 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 GDF9O60383 454 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 IL1BP01584 269 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 IGLV3-19P01714 112 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 C7P10643 843 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 ACADMP11310 421 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 DESP17661 470 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 FECHP22830 423 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 IL4RP24394 825 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 GKP32189 559 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 MPLP40238 635 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 NNMTP40261 264 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 SERPINH1P50454 418 aaKnown RBP11.76□□□□□ -0.53
VMP1-211ENST00000591315 VASPP50552 380 aaPredicted RBP11.76□□□□□ -0.53
VMP1-211ENST00000591315 DNA2P51530 1060 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 ARSEP51690 589 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 BYSLQ13895 437 aaKnown RBP11.76□□□□□ -0.53
VMP1-211ENST00000591315 ACAP1Q15027 740 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 DPYSL2Q16555 572 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 BOLA3Q53S33 107 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 PLA2G2CQ5R387 149 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 ATXN7L2Q5T6C5 722 aaPredicted RBP11.76□□□□□ -0.53
VMP1-211ENST00000591315 DPY19L3Q6ZPD9 716 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 POLNQ7Z5Q5 900 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 ZNF354CQ86Y25 554 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 TMEM139Q8IV31 216 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 UMODL1-AS1Q8N2C9 162 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 OR6K2Q8NGY2 324 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 GANCQ8TET4 914 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 TSC1Q92574 1164 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 VOPP1Q96AW1 172 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 LOXL4Q96JB6 756 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 PPP1R9BQ96SB3 815 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 TM6SF2Q9BZW4 377 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 MAGEH1Q9H213 219 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 NEUROG2Q9H2A3 272 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 CATSPERBQ9H7T0 1116 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 SEMA4GQ9NTN9 838 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 FBXL12Q9NXK8 326 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 SALL4Q9UJQ4 1053 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 PCDHA13Q9Y5I0 950 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 CABIN1Q9Y6J0 2220 aa11.76□□□□□ -0.53
VMP1-211ENST00000591315 SHROOM3Q8TF72 1996 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms