RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 GANCQ8TET4 914 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 OR8D1Q8WZ84 308 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 ARHGEF2Q92974 986 aaKnown RBP9.4□□□□□ -0.9
DNMT1-223ENST00000591239 RMDN1Q96DB5 314 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 ARHGEF26Q96DR7 871 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 PEBP4Q96S96 227 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 CHP1Q99653 195 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 OMDQ99983 421 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 NCAPGQ9BPX3 1015 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 SNRNP25Q9BV90 132 aaKnown RBP9.4□□□□□ -0.9
DNMT1-223ENST00000591239 NUP85Q9BW27 656 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 ACE2Q9BYF1 805 aaPredicted RBP9.4□□□□□ -0.9
DNMT1-223ENST00000591239 BTBD1Q9H0C5 482 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 RBSNQ9H1K0 784 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 DEF6Q9H4E7 631 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 DHX35Q9H5Z1 703 aaKnown RBP9.4□□□□□ -0.9
DNMT1-223ENST00000591239 CATSPERBQ9H7T0 1116 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 RXFP3Q9NSD7 469 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 GPATCH2LQ9NWQ4 482 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 FBXL12Q9NXK8 326 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 SERGEFQ9UGK8 458 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 ANAPC7Q9UJX3 599 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 CDV3Q9UKY7 258 aaKnown RBP9.4□□□□□ -0.9
DNMT1-223ENST00000591239 HPCAL4Q9UM19 191 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 NENFQ9UMX5 172 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 NCKAP1Q9Y2A7 1128 aa9.4□□□□□ -0.9
DNMT1-223ENST00000591239 TNRC6BQ9UPQ9 1833 aaKnown RBP9.4□□□□□ -0.91
DNMT1-223ENST00000591239 CXorf51AA0A1B0GTR3 108 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 A0A1W2PP55 124 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 LNP1A1A4G5 178 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 METTL12A8MUP2 240 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 MEI4A8MW99 385 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 WASH4PA8MWX3 477 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 EIF3CLB5ME19 914 aaKnown RBP9.39□□□□□ -0.91
DNMT1-223ENST00000591239 AKR1B15C9JRZ8 316 aaPredicted RBP9.39□□□□□ -0.91
DNMT1-223ENST00000591239 MCF2LO15068 1137 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 ALOX15BO15296 676 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 FGF10O15520 208 aaPredicted RBP9.39□□□□□ -0.91
DNMT1-223ENST00000591239 AKR1B10O60218 316 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 BNIP3LO60238 219 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 RNASEH2AO75792 299 aaKnown RBP9.39□□□□□ -0.91
DNMT1-223ENST00000591239 SEMA4FO95754 770 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 C5AR1P21730 350 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 MAOBP27338 520 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 PCK1P35558 622 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 SERPINH1P50454 418 aaKnown RBP9.39□□□□□ -0.91
DNMT1-223ENST00000591239 TPI1P60174 286 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 ARF5P84085 180 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 NUMA1Q14980 2115 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 CA9Q16790 459 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 DUOXA1Q1HG43 343 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 TRIM61Q5EBN2 209 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 WDR45BQ5MNZ6 344 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 DCAF12L1Q5VU92 463 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 DAB2IPQ5VWQ8 1189 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 SLC23A3Q6PIS1 610 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 RABEPKQ7Z6M1 372 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 GAS2L3Q86XJ1 694 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 PSTKQ8IV42 348 aaKnown RBP9.39□□□□□ -0.91
DNMT1-223ENST00000591239 HDDC3Q8N4P3 179 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 AADATQ8N5Z0 425 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 NIPA2Q8N8Q9 360 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 OR2A12Q8NGT7 310 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 CEP76Q8TAP6 659 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 NETO1Q8TDF5 533 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 DNASE2BQ8WZ79 361 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 BTBD6Q96KE9 485 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 CCDC114Q96M63 670 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 CCDC42Q96M95 316 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 EIF3CQ99613 913 aaKnown RBP9.39□□□□□ -0.91
DNMT1-223ENST00000591239 NUSAP1Q9BXS6 441 aaKnown RBP9.39□□□□□ -0.91
DNMT1-223ENST00000591239 PCED1AQ9H1Q7 454 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 NEUROG2Q9H2A3 272 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 C6orf106Q9H6K1 298 aaPredicted RBP9.39□□□□□ -0.91
DNMT1-223ENST00000591239 NOL6Q9H6R4 1146 aaKnown RBP9.39□□□□□ -0.91
DNMT1-223ENST00000591239 NHEJ1Q9H9Q4 299 aaPredicted RBP9.39□□□□□ -0.91
DNMT1-223ENST00000591239 SGK2Q9HBY8 427 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 DLL3Q9NYJ7 618 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 DONSONQ9NYP3 566 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 IP6K2Q9UHH9 426 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 EVLQ9UI08 416 aaPredicted RBP9.39□□□□□ -0.91
DNMT1-223ENST00000591239 SARDHQ9UL12 918 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 PPM1HQ9ULR3 514 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 FZD4Q9ULV1 537 aa9.39□□□□□ -0.91
DNMT1-223ENST00000591239 CHD5Q8TDI0 1954 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 FAM47DPA6NHR8 397 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 MYO1FO00160 1098 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 EEF2KO00418 725 aaKnown RBP9.38□□□□□ -0.91
DNMT1-223ENST00000591239 DAPK3O43293 454 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 KDELR3O43731 214 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 ZNF821O75541 412 aaPredicted RBP9.38□□□□□ -0.91
DNMT1-223ENST00000591239 CD160O95971 181 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 CFIP05156 583 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 SERPINF2P08697 491 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 H2AFZP0C0S5 128 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 GNSP15586 552 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 TCF4P15884 667 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 GOT1P17174 413 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 IL1R2P27930 398 aa9.38□□□□□ -0.91
DNMT1-223ENST00000591239 DRD3P35462 400 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms