RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 CCDC66A2RUB6 948 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 K7ERQ8 282 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 APOL1O14791 398 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 ZSCAN12O43309 604 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 MFSD11O43934 449 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 RNASEH1O60930 286 aaKnown RBP17.17■□□□□ 0.34
LSM14A-208ENST00000590416 ZMPSTE24O75844 475 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 ZRANB2O95218 330 aaKnown RBP eCLIP17.17■□□□□ 0.34
LSM14A-208ENST00000590416 VAV1P15498 845 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 IL4RP24394 825 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 CTNNA2P26232 953 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 CTNNA1P35221 906 aaKnown RBP17.17■□□□□ 0.34
LSM14A-208ENST00000590416 RECQLP46063 649 aaPredicted RBP17.17■□□□□ 0.34
LSM14A-208ENST00000590416 SERPINH1P50454 418 aaKnown RBP17.17■□□□□ 0.34
LSM14A-208ENST00000590416 DYNLT1P63172 113 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 SLC20A2Q08357 652 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 TCF15Q12870 199 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 LLGL1Q15334 1064 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 ZNF528Q3MIS6 628 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 NCBP2-AS2Q69YL0 99 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 C22orf39Q6P5X5 142 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 Q6ZVU0 165 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 ARHGAP12Q8IWW6 846 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 KATNAL2Q8IYT4 538 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 ATPAF2Q8N5M1 289 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 MDGA1Q8NFP4 955 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 ATOH1Q92858 354 aaPredicted RBP17.17■□□□□ 0.34
LSM14A-208ENST00000590416 FAF2Q96CS3 445 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 CCDC114Q96M63 670 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 RNF157Q96PX1 679 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 FAM126AQ9BYI3 521 aaPredicted RBP17.17■□□□□ 0.34
LSM14A-208ENST00000590416 KLC2Q9H0B6 622 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 IRF2BPLQ9H1B7 796 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 SLC6A17Q9H1V8 727 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 PRSS16Q9NQE7 514 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 ZSCAN32Q9NX65 697 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 UBA2Q9UBT2 640 aaPredicted RBP17.17■□□□□ 0.34
LSM14A-208ENST00000590416 HS3ST2Q9Y278 367 aa17.17■□□□□ 0.34
LSM14A-208ENST00000590416 FCF1Q9Y324 198 aaKnown RBP17.17■□□□□ 0.34
LSM14A-208ENST00000590416 FARP1Q9Y4F1 1045 aaPredicted RBP17.17■□□□□ 0.34
LSM14A-208ENST00000590416 TARSL2A2RTX5 802 aaKnown RBP17.16■□□□□ 0.34
LSM14A-208ENST00000590416 SMAD6O43541 496 aaKnown RBP17.16■□□□□ 0.34
LSM14A-208ENST00000590416 ATP9BO43861 1147 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 MAP3K6O95382 1288 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 ACADMP11310 421 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 TDGF1P13385 188 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 GABRG2P18507 467 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 NDUFV2P19404 249 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 CETN2P41208 172 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 CLCN6P51797 869 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 RWDD2BP57060 319 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 CAMK2GQ13555 558 aaPredicted RBP17.16■□□□□ 0.34
LSM14A-208ENST00000590416 ZC3H14Q6PJT7 736 aaKnown RBP17.16■□□□□ 0.34
LSM14A-208ENST00000590416 SPOCD1Q6ZMY3 1216 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 ARHGAP36Q6ZRI8 547 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 ZNF662Q6ZS27 426 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 LONP2Q86WA8 852 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 VSIG1Q86XK7 387 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 TP53INP2Q8IXH6 220 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 RCOR2Q8IZ40 523 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 STK40Q8N2I9 435 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 RYBPQ8N488 228 aaPredicted RBP17.16■□□□□ 0.34
LSM14A-208ENST00000590416 EXD1Q8NHP7 514 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 PRCCQ92733 491 aaPredicted RBP17.16■□□□□ 0.34
LSM14A-208ENST00000590416 SIPA1Q96FS4 1042 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 TNKS2Q9H2K2 1166 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 FBRSQ9HAH7 460 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 PRDM16Q9HAZ2 1276 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 PCDHA3Q9Y5H8 950 aa17.16■□□□□ 0.34
LSM14A-208ENST00000590416 EML5Q05BV3 1969 aa17.15■□□□□ 0.34
LSM14A-208ENST00000590416 C3orf70A6NLC5 250 aaPredicted RBP17.15■□□□□ 0.34
LSM14A-208ENST00000590416 MIF4GDA9UHW6 222 aaKnown RBP17.15■□□□□ 0.34
LSM14A-208ENST00000590416 ZNF487B1APH4 448 aa17.15■□□□□ 0.34
LSM14A-208ENST00000590416 J3KR12 359 aa17.15■□□□□ 0.34
LSM14A-208ENST00000590416 ZFXP17010 805 aaPredicted RBP17.15■□□□□ 0.34
LSM14A-208ENST00000590416 VASPP50552 380 aaPredicted RBP17.15■□□□□ 0.34
LSM14A-208ENST00000590416 PAFAH1B3Q15102 231 aaKnown RBP17.15■□□□□ 0.34
LSM14A-208ENST00000590416 TFDP3Q5H9I0 405 aa17.15■□□□□ 0.34
LSM14A-208ENST00000590416 AFMIDQ63HM1 303 aa17.15■□□□□ 0.34
LSM14A-208ENST00000590416 ZNF776Q68DI1 518 aaPredicted RBP17.15■□□□□ 0.34
LSM14A-208ENST00000590416 WDR5BQ86VZ2 330 aa17.15■□□□□ 0.34
LSM14A-208ENST00000590416 RASSF3Q86WH2 238 aa17.15■□□□□ 0.34
LSM14A-208ENST00000590416 TMPRSS6Q8IU80 811 aa17.15■□□□□ 0.34
LSM14A-208ENST00000590416 PQLC3Q8N755 202 aa17.15■□□□□ 0.34
LSM14A-208ENST00000590416 NSMCE1Q8WV22 266 aa17.15■□□□□ 0.34
LSM14A-208ENST00000590416 OR8D1Q8WZ84 308 aa17.15■□□□□ 0.34
LSM14A-208ENST00000590416 PTPRN2Q92932 1015 aa17.15■□□□□ 0.34
LSM14A-208ENST00000590416 TM6SF2Q9BZW4 377 aa17.15■□□□□ 0.34
LSM14A-208ENST00000590416 TRMT1Q9NXH9 659 aaKnown RBP17.15■□□□□ 0.34
LSM14A-208ENST00000590416 EBF1Q9UH73 591 aa17.15■□□□□ 0.34
LSM14A-208ENST00000590416 RAPGEFL1Q9UHV5 662 aa17.15■□□□□ 0.34
LSM14A-208ENST00000590416 IPO11Q9UI26 975 aaKnown RBP17.15■□□□□ 0.34
LSM14A-208ENST00000590416 HEY1Q9Y5J3 304 aa17.15■□□□□ 0.34
LSM14A-208ENST00000590416 PRAMEF11O60813 436 aa17.14■□□□□ 0.33
LSM14A-208ENST00000590416 TMCC1O94876 653 aa17.14■□□□□ 0.33
LSM14A-208ENST00000590416 DNTTP04053 509 aa17.14■□□□□ 0.33
LSM14A-208ENST00000590416 KRT10P13645 584 aa17.14■□□□□ 0.33
LSM14A-208ENST00000590416 HOXA6P31267 233 aa17.14■□□□□ 0.33
LSM14A-208ENST00000590416 CDKN2BP42772 138 aa17.14■□□□□ 0.33
LSM14A-208ENST00000590416 PSMD8P48556 350 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms