RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 TOP3BO95985 862 aaKnown RBP7.78□□□□□ -1.16
NPC1-208ENST00000590301 CYP1A1P04798 512 aaPredicted RBP7.78□□□□□ -1.16
NPC1-208ENST00000590301 MMEP08473 750 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 CCDC172P0C7W6 258 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 SRCP12931 536 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 VAV1P15498 845 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 SDC4P31431 198 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 PTPN9P43378 593 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 RECQLP46063 649 aaPredicted RBP7.78□□□□□ -1.16
NPC1-208ENST00000590301 NSFP46459 744 aaKnown RBP7.78□□□□□ -1.16
NPC1-208ENST00000590301 RXRGP48443 463 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 IRAK1P51617 712 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 GSCP56915 257 aaPredicted RBP7.78□□□□□ -1.16
NPC1-208ENST00000590301 JAM2P57087 298 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 NXPH1P58417 271 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 POLR2FP61218 127 aaKnown RBP7.78□□□□□ -1.16
NPC1-208ENST00000590301 SYCP1Q15431 976 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 STX1AQ16623 288 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 ALFQ53S48 1182 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 PPP1R2P3Q6NXS1 205 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.78□□□□□ -1.16
NPC1-208ENST00000590301 CCNI2Q6ZMN8 369 aaPredicted RBP7.78□□□□□ -1.16
NPC1-208ENST00000590301 Q6ZVU0 165 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 STRADAQ7RTN6 431 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 PCDH20Q8N6Y1 951 aaKnown RBP7.78□□□□□ -1.16
NPC1-208ENST00000590301 PDCD7Q8N8D1 485 aaKnown RBP7.78□□□□□ -1.16
NPC1-208ENST00000590301 NEK11Q8NG66 645 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 OR52K2Q8NGK3 314 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 OR2A12Q8NGT7 310 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 FAM174AQ8TBP5 190 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 PIP4K2CQ8TBX8 421 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 CPA5Q8WXQ8 436 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 ZCCHC14Q8WYQ9 949 aaKnown RBP7.78□□□□□ -1.16
NPC1-208ENST00000590301 PPP1R16AQ96I34 528 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 HDAC8Q9BY41 377 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 OSBPL2Q9H1P3 480 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 VPS16Q9H269 839 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 DYRK4Q9NR20 520 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 FAM207AQ9NSI2 230 aaPredicted RBP7.78□□□□□ -1.16
NPC1-208ENST00000590301 FTSJ1Q9UET6 329 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 LIMA1Q9UHB6 759 aaKnown RBP7.78□□□□□ -1.16
NPC1-208ENST00000590301 VPS51Q9UID3 782 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 ZMIZ1Q9ULJ6 1067 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 SIK3Q9Y2K2 1263 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 MUC22E2RYF6 1773 aaPredicted RBP7.78□□□□□ -1.16
NPC1-208ENST00000590301 EML5Q05BV3 1969 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 MAP1BP46821 2468 aaKnown RBP7.78□□□□□ -1.16
NPC1-208ENST00000590301 ABCA7Q8IZY2 2146 aa7.78□□□□□ -1.16
NPC1-208ENST00000590301 PCDH15Q96QU1 1955 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 ANKRD62A6NC57 917 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 I6L893 689 aaPredicted RBP7.77□□□□□ -1.17
NPC1-208ENST00000590301 SRGAP2O75044 1071 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 RTN2O75298 545 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 GFPT2O94808 682 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 CALB1P05937 261 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 C1SP09871 688 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 RHOQP17081 205 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 DESP17661 470 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 TFE3P19532 575 aaPredicted RBP7.77□□□□□ -1.17
NPC1-208ENST00000590301 CHRNA3P32297 505 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 ADRA1BP35368 520 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 GGCXP38435 758 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 MAPKAPK2P49137 400 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 SERPINH1P50454 418 aaKnown RBP7.77□□□□□ -1.17
NPC1-208ENST00000590301 COPB1P53618 953 aaKnown RBP7.77□□□□□ -1.17
NPC1-208ENST00000590301 FMO1Q01740 532 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 GNA12Q03113 381 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 CNTN1Q12860 1018 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 STAT4Q14765 748 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 LCE2DQ5TA82 110 aaPredicted RBP7.77□□□□□ -1.17
NPC1-208ENST00000590301 AGBL4Q5VU57 503 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 C22orf39Q6P5X5 142 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 TMPRSS7Q7RTY8 843 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 TFAP2DQ7Z6R9 452 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 FAM131BQ86XD5 332 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 CENPIQ92674 756 aaPredicted RBP7.77□□□□□ -1.17
NPC1-208ENST00000590301 NTAN1Q96AB6 310 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 ISG20Q96AZ6 181 aaKnown RBP7.77□□□□□ -1.17
NPC1-208ENST00000590301 LRIG1Q96JA1 1093 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 CFAP57Q96MR6 1250 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 ERGIC2Q96RQ1 377 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 PSMB7Q99436 277 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 NAT10Q9H0A0 1025 aaKnown RBP7.77□□□□□ -1.17
NPC1-208ENST00000590301 EBF2Q9HAK2 575 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 ATP13A1Q9HD20 1204 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 ANLNQ9NQW6 1124 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 FANCLQ9NW38 375 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 ZNF212Q9UDV6 495 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 OR12D3Q9UGF7 316 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 SARDHQ9UL12 918 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 PCDHGA1Q9Y5H4 931 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 ZFHX4Q86UP3 3567 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 AKAP13Q12802 2813 aa7.77□□□□□ -1.17
NPC1-208ENST00000590301 ITPR1Q14643 2758 aa7.76□□□□□ -1.17
NPC1-208ENST00000590301 A0A0D9SEW6 157 aa7.76□□□□□ -1.17
NPC1-208ENST00000590301 ZSCAN5CA6NGD5 496 aaPredicted RBP7.76□□□□□ -1.17
NPC1-208ENST00000590301 C2CD4BA6NLJ0 364 aa7.76□□□□□ -1.17
NPC1-208ENST00000590301 CBX4O00257 560 aa7.76□□□□□ -1.17
NPC1-208ENST00000590301 KPNA3O00505 521 aaPredicted RBP7.76□□□□□ -1.17
NPC1-208ENST00000590301 BNIP3LO60238 219 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms