RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 HOXB3P14651 431 aaPredicted RBP18.45■□□□□ 0.54
H3F3B-209ENST00000589949 ZNF18P17022 549 aa18.45■□□□□ 0.54
H3F3B-209ENST00000589949 MTA1Q13330 715 aa18.45■□□□□ 0.54
H3F3B-209ENST00000589949 CDKAL1Q5VV42 579 aa18.45■□□□□ 0.54
H3F3B-209ENST00000589949 NAPEPLDQ6IQ20 393 aa18.45■□□□□ 0.54
H3F3B-209ENST00000589949 DHRS13Q6UX07 377 aa18.45■□□□□ 0.54
H3F3B-209ENST00000589949 KANSL1Q7Z3B3 1105 aa18.45■□□□□ 0.54
H3F3B-209ENST00000589949 DSG4Q86SJ6 1040 aa18.45■□□□□ 0.54
H3F3B-209ENST00000589949 PHLDB2Q86SQ0 1253 aa18.45■□□□□ 0.54
H3F3B-209ENST00000589949 TRIM69Q86WT6 500 aa18.45■□□□□ 0.54
H3F3B-209ENST00000589949 FAM131BQ86XD5 332 aa18.45■□□□□ 0.54
H3F3B-209ENST00000589949 ATP11CQ8NB49 1132 aa18.45■□□□□ 0.54
H3F3B-209ENST00000589949 PPP1R9BQ96SB3 815 aa18.45■□□□□ 0.54
H3F3B-209ENST00000589949 VPS16Q9H269 839 aa18.45■□□□□ 0.54
H3F3B-209ENST00000589949 TNKS2Q9H2K2 1166 aa18.45■□□□□ 0.54
H3F3B-209ENST00000589949 KDM4CQ9H3R0 1056 aa18.45■□□□□ 0.54
H3F3B-209ENST00000589949 ACTL7AQ9Y615 435 aa18.45■□□□□ 0.54
H3F3B-209ENST00000589949 CELSR3Q9NYQ7 3312 aa18.45■□□□□ 0.54
H3F3B-209ENST00000589949 SRGAP2O75044 1071 aa18.44■□□□□ 0.54
H3F3B-209ENST00000589949 ZMPSTE24O75844 475 aa18.44■□□□□ 0.54
H3F3B-209ENST00000589949 GFPT2O94808 682 aa18.44■□□□□ 0.54
H3F3B-209ENST00000589949 GJB6O95452 261 aa18.44■□□□□ 0.54
H3F3B-209ENST00000589949 LSM8O95777 96 aaKnown RBP18.44■□□□□ 0.54
H3F3B-209ENST00000589949 F9P00740 461 aa18.44■□□□□ 0.54
H3F3B-209ENST00000589949 EEF1GP26641 437 aaKnown RBP18.44■□□□□ 0.54
H3F3B-209ENST00000589949 EPHA8P29322 1005 aaPredicted RBP18.44■□□□□ 0.54
H3F3B-209ENST00000589949 CHRNA3P32297 505 aa18.44■□□□□ 0.54
H3F3B-209ENST00000589949 DNAJC3Q13217 504 aa18.44■□□□□ 0.54
H3F3B-209ENST00000589949 KRT31Q15323 416 aa18.44■□□□□ 0.54
H3F3B-209ENST00000589949 SMAD1Q15797 465 aaKnown RBP18.44■□□□□ 0.54
H3F3B-209ENST00000589949 FAM46CQ5VWP2 391 aa18.44■□□□□ 0.54
H3F3B-209ENST00000589949 LRSAM1Q6UWE0 723 aa18.44■□□□□ 0.54
H3F3B-209ENST00000589949 SETD3Q86TU7 594 aaPredicted RBP18.44■□□□□ 0.54
H3F3B-209ENST00000589949 MFSD2AQ8NA29 543 aa18.44■□□□□ 0.54
H3F3B-209ENST00000589949 DCAF4L2Q8NA75 395 aa18.44■□□□□ 0.54
H3F3B-209ENST00000589949 KLK6Q92876 244 aa18.44■□□□□ 0.54
H3F3B-209ENST00000589949 GDF3Q9NR23 364 aa18.44■□□□□ 0.54
H3F3B-209ENST00000589949 FTSJ1Q9UET6 329 aa18.44■□□□□ 0.54
H3F3B-209ENST00000589949 DACH1Q9UI36 760 aa18.44■□□□□ 0.54
H3F3B-209ENST00000589949 COL5A1P20908 1838 aaPredicted RBP18.44■□□□□ 0.54
H3F3B-209ENST00000589949 LAMA5O15230 3695 aa18.43■□□□□ 0.54
H3F3B-209ENST00000589949 C1QTNF3-AMACRE9PGA6 284 aa18.43■□□□□ 0.54
H3F3B-209ENST00000589949 ENDOD1O94919 500 aa18.43■□□□□ 0.54
H3F3B-209ENST00000589949 CYP1A1P04798 512 aaPredicted RBP18.43■□□□□ 0.54
H3F3B-209ENST00000589949 ITGAVP06756 1048 aa18.43■□□□□ 0.54
H3F3B-209ENST00000589949 PRLRP16471 622 aa18.43■□□□□ 0.54
H3F3B-209ENST00000589949 JAM2P57087 298 aa18.43■□□□□ 0.54
H3F3B-209ENST00000589949 KRT83P78385 493 aa18.43■□□□□ 0.54
H3F3B-209ENST00000589949 ATP11AP98196 1134 aa18.43■□□□□ 0.54
H3F3B-209ENST00000589949 FMO1Q01740 532 aa18.43■□□□□ 0.54
H3F3B-209ENST00000589949 CLEC17AQ6ZS10 378 aa18.43■□□□□ 0.54
H3F3B-209ENST00000589949 PRPF39Q86UA1 669 aaKnown RBP18.43■□□□□ 0.54
H3F3B-209ENST00000589949 EID2Q8N6I1 236 aa18.43■□□□□ 0.54
H3F3B-209ENST00000589949 JOSD2Q8TAC2 188 aa18.43■□□□□ 0.54
H3F3B-209ENST00000589949 SLC30A5Q8TAD4 765 aa18.43■□□□□ 0.54
H3F3B-209ENST00000589949 ENOX1Q8TC92 643 aaKnown RBP18.43■□□□□ 0.54
H3F3B-209ENST00000589949 HAPLN3Q96S86 360 aa18.43■□□□□ 0.54
H3F3B-209ENST00000589949 PCDHB18PQ96TA0 734 aa18.43■□□□□ 0.54
H3F3B-209ENST00000589949 C2orf49Q9BVC5 232 aaPredicted RBP18.43■□□□□ 0.54
H3F3B-209ENST00000589949 CCDC86Q9H6F5 360 aaKnown RBP18.43■□□□□ 0.54
H3F3B-209ENST00000589949 ERVMER34-1Q9H9K5 563 aa18.43■□□□□ 0.54
H3F3B-209ENST00000589949 METTL5Q9NRN9 209 aaKnown RBP18.43■□□□□ 0.54
H3F3B-209ENST00000589949 DOCK4Q8N1I0 1966 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 GOLGA4Q13439 2230 aaKnown RBP18.42■□□□□ 0.54
H3F3B-209ENST00000589949 APC2O95996 2303 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 TRABD2BA6NFA1 517 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 FAM72CH0Y354 149 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 KPNA3O00505 521 aaPredicted RBP18.42■□□□□ 0.54
H3F3B-209ENST00000589949 RNGTTO60942 597 aaKnown RBP18.42■□□□□ 0.54
H3F3B-209ENST00000589949 CD160O95971 181 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 MMP8P22894 467 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 OR1E1P30953 314 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 RXRGP48443 463 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 POLR2FP61218 127 aaKnown RBP18.42■□□□□ 0.54
H3F3B-209ENST00000589949 PTP4A2Q12974 167 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 C15orf59Q2T9L4 293 aaPredicted RBP18.42■□□□□ 0.54
H3F3B-209ENST00000589949 FAM72AQ5TYM5 149 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 SFMBT2Q5VUG0 894 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 FAM72DQ6L9T8 149 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 C22orf39Q6P5X5 142 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 C19orf48Q6RUI8 117 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 LRRC31Q6UY01 552 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 DPY19L3Q6ZPD9 716 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 ARCQ7LC44 396 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 FAM72BQ86X60 149 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 TMEM145Q8NBT3 493 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 TMIEQ8NEW7 156 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 GPT2Q8TD30 523 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 VOPP1Q96AW1 172 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 SKA1Q96BD8 255 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 CNDP2Q96KP4 475 aaKnown RBP18.42■□□□□ 0.54
H3F3B-209ENST00000589949 MYOCQ99972 504 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 NLRC4Q9NPP4 1024 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 FAM207AQ9NSI2 230 aaPredicted RBP18.42■□□□□ 0.54
H3F3B-209ENST00000589949 NDFIP2Q9NV92 336 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 FANCLQ9NW38 375 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 DMTF1Q9Y222 760 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 SIK3Q9Y2K2 1263 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 GPSM3Q9Y4H4 160 aa18.42■□□□□ 0.54
H3F3B-209ENST00000589949 ARID1BQ8NFD5 2236 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms