RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 GOLGA8SH3BPF8 625 aa12.51□□□□□ -0.41
VAT1-206ENST00000589709 PLK4O00444 970 aa12.51□□□□□ -0.41
VAT1-206ENST00000589709 SNAP91O60641 907 aa12.51□□□□□ -0.41
VAT1-206ENST00000589709 RNGTTO60942 597 aaKnown RBP12.51□□□□□ -0.41
VAT1-206ENST00000589709 CYP1A1P04798 512 aaPredicted RBP12.51□□□□□ -0.41
VAT1-206ENST00000589709 ITGAVP06756 1048 aa12.51□□□□□ -0.41
VAT1-206ENST00000589709 C1SP09871 688 aa12.51□□□□□ -0.41
VAT1-206ENST00000589709 CDK4P11802 303 aa12.51□□□□□ -0.41
VAT1-206ENST00000589709 MMP8P22894 467 aa12.51□□□□□ -0.41
VAT1-206ENST00000589709 OR1E1P30953 314 aa12.51□□□□□ -0.41
VAT1-206ENST00000589709 CHRNA3P32297 505 aa12.51□□□□□ -0.41
VAT1-206ENST00000589709 TAS2R38P59533 333 aa12.51□□□□□ -0.41
VAT1-206ENST00000589709 IL9RQ01113 521 aa12.51□□□□□ -0.41
VAT1-206ENST00000589709 CDR2Q01850 454 aa12.51□□□□□ -0.41
VAT1-206ENST00000589709 SMAD1Q15797 465 aaKnown RBP12.51□□□□□ -0.41
VAT1-206ENST00000589709 SETMARQ53H47 684 aaPredicted RBP12.51□□□□□ -0.41
VAT1-206ENST00000589709 NAA35Q5VZE5 725 aa12.51□□□□□ -0.41
VAT1-206ENST00000589709 RBM43Q6ZSC3 357 aaKnown RBP12.51□□□□□ -0.41
VAT1-206ENST00000589709 CPA5Q8WXQ8 436 aa12.51□□□□□ -0.41
VAT1-206ENST00000589709 MPP6Q9NZW5 540 aa12.51□□□□□ -0.41
VAT1-206ENST00000589709 PPARGC1AQ9UBK2 798 aaKnown RBP12.51□□□□□ -0.41
VAT1-206ENST00000589709 DKK4Q9UBT3 224 aa12.51□□□□□ -0.41
VAT1-206ENST00000589709 FTSJ1Q9UET6 329 aa12.51□□□□□ -0.41
VAT1-206ENST00000589709 PLXNA2O75051 1894 aa12.51□□□□□ -0.41
VAT1-206ENST00000589709 TMEM131Q92545 1883 aa12.51□□□□□ -0.41
VAT1-206ENST00000589709 ZFHX4Q86UP3 3567 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 KNTC1P50748 2209 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 DSPP15924 2871 aaKnown RBP12.5□□□□□ -0.41
VAT1-206ENST00000589709 PRAMEF26H0Y7S4 382 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 K7ERQ8 282 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 SMAD6O43541 496 aaKnown RBP12.5□□□□□ -0.41
VAT1-206ENST00000589709 ZMPSTE24O75844 475 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 PRNPP04156 253 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 CTSLP07711 333 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 PTMSP20962 102 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 EPHA8P29322 1005 aaPredicted RBP12.5□□□□□ -0.41
VAT1-206ENST00000589709 JAM2P57087 298 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 NRG1Q02297 640 aaPredicted RBP12.5□□□□□ -0.41
VAT1-206ENST00000589709 STAT4Q14765 748 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 KRT31Q15323 416 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 C2CD6Q53TS8 623 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 PIP5KL1Q5T9C9 394 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 RETSATQ6NUM9 610 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 TRIM72Q6ZMU5 477 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 TFAP2DQ7Z6R9 452 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 SPATS2Q86XZ4 545 aaKnown RBP12.5□□□□□ -0.41
VAT1-206ENST00000589709 GATAD2AQ86YP4 633 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 CFAP57Q96MR6 1250 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 HDAC8Q9BY41 377 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 ZYG11BQ9C0D3 744 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 CEP44Q9C0F1 390 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 VPS16Q9H269 839 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 CCDC86Q9H6F5 360 aaKnown RBP12.5□□□□□ -0.41
VAT1-206ENST00000589709 TMPRSS4Q9NRS4 437 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 PLXNB3Q9ULL4 1909 aa12.5□□□□□ -0.41
VAT1-206ENST00000589709 ZFYVE26Q68DK2 2539 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 GOLGA8CPA6NN73 597 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 KPNA3O00505 521 aaPredicted RBP12.49□□□□□ -0.41
VAT1-206ENST00000589709 BNIP3LO60238 219 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 SRGAP2O75044 1071 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 ZNF821O75541 412 aaPredicted RBP12.49□□□□□ -0.41
VAT1-206ENST00000589709 GFPT2O94808 682 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 LDOC1O95751 146 aaPredicted RBP12.49□□□□□ -0.41
VAT1-206ENST00000589709 TPM2P07951 284 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 CHRNB2P17787 502 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 RRM1P23921 792 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 MAT2AP31153 395 aaKnown RBP12.49□□□□□ -0.41
VAT1-206ENST00000589709 ADRA1BP35368 520 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 SOX5P35711 763 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 RECQLP46063 649 aaPredicted RBP12.49□□□□□ -0.41
VAT1-206ENST00000589709 POLR2FP61218 127 aaKnown RBP12.49□□□□□ -0.41
VAT1-206ENST00000589709 FMO1Q01740 532 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 CAMK2BQ13554 666 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 ARL13BQ3SXY8 428 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 POM121L1PQ3SYA9 428 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 FKBP15Q5T1M5 1219 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 SFMBT2Q5VUG0 894 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 C22orf39Q6P5X5 142 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 KANSL1Q7Z3B3 1105 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 TMPRSS12Q86WS5 348 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 FAM131BQ86XD5 332 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 TMEM145Q8NBT3 493 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 OR7D4Q8NG98 312 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 SLC20A1Q8WUM9 679 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 GBP4Q96PP9 640 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 SPON2Q9BUD6 331 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 OSBPL2Q9H1P3 480 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 FAM207AQ9NSI2 230 aaPredicted RBP12.49□□□□□ -0.41
VAT1-206ENST00000589709 SIK3Q9Y2K2 1263 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 PTPRBP23467 1997 aa12.49□□□□□ -0.41
VAT1-206ENST00000589709 NYNRINQ9P2P1 1898 aaKnown RBP12.48□□□□□ -0.41
VAT1-206ENST00000589709 COL5A1P20908 1838 aaPredicted RBP12.48□□□□□ -0.41
VAT1-206ENST00000589709 A0A1W2PQU0 124 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 LRRC10BA6NIK2 292 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 C2CD4BA6NLJ0 364 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 CBX4O00257 560 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 ENC1O14682 589 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 UNGP13051 313 aaPredicted RBP12.48□□□□□ -0.41
VAT1-206ENST00000589709 SDC4P31431 198 aa12.48□□□□□ -0.41
VAT1-206ENST00000589709 ETFBP38117 255 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms