RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 FSBPO95073 299 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 VNN2O95498 520 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 LATS1O95835 1130 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 MPOP05164 745 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 ADRA1DP25100 572 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 FOXN2P32314 431 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 OR1D2P34982 312 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 PPM1AP35813 382 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 PBX3P40426 434 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 PGFP49763 221 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 MNX1P50219 401 aaPredicted RBP10.58□□□□□ -0.72
VPS25-203ENST00000589520 PDE1BQ01064 536 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 CDK18Q07002 472 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 RAB33AQ14088 237 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 VEPH1Q14D04 833 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 SETDB1Q15047 1291 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 TAF12Q16514 161 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 TCTN1Q2MV58 587 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 RABGAP1LQ5R372 815 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 ARTNQ5T4W7 220 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 MARC1Q5VT66 337 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 FBXL22Q6P050 247 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 PKN3Q6P5Z2 889 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 TRMT10BQ6PF06 316 aaKnown RBP10.58□□□□□ -0.72
VPS25-203ENST00000589520 RSPO2Q6UXX9 243 aaPredicted RBP10.58□□□□□ -0.72
VPS25-203ENST00000589520 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.58□□□□□ -0.722e-16■■■□□ 18.6
VPS25-203ENST00000589520 NLRP9Q7RTR0 991 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 TAS1R1Q7RTX1 841 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 DEFB128Q7Z7B8 93 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 C14orf80Q86SX3 495 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 DDX53Q86TM3 631 aaKnown RBP10.58□□□□□ -0.72
VPS25-203ENST00000589520 ITIH5Q86UX2 942 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 SLC39A11Q8N1S5 342 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 TEX26Q8N6G2 289 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 PPHLN1Q8NEY8 458 aaKnown RBP10.58□□□□□ -0.72
VPS25-203ENST00000589520 ISL2Q96A47 359 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 RANBP9Q96S59 729 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 SRPK1Q96SB4 655 aaKnown RBP10.58□□□□□ -0.72
VPS25-203ENST00000589520 GORASP1Q9BQQ3 440 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 TUBB6Q9BUF5 446 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 CEP41Q9BYV8 373 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 MAGEH1Q9H213 219 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 ARNT2Q9HBZ2 717 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 MLXIPLQ9NP71 852 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 NUDT5Q9UKK9 219 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 NR2E3Q9Y5X4 410 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 USH1CQ9Y6N9 552 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 ZCWPW2A0A1B0GU75 182 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 ZNF840PA6NDX5 716 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 ACSL4O60488 711 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 RAMP2O60895 175 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 DCTN3O75935 186 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 UPP2O95045 317 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 TIMP1P01033 207 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 EPOP01588 193 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 ATP5BP06576 529 aaKnown RBP10.57□□□□□ -0.72
VPS25-203ENST00000589520 ITGA2BP08514 1039 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 NEFHP12036 1026 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 TACR2P21452 398 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 ELF1P32519 619 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 ADRA1AP35348 466 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 ETFBP38117 255 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 SERPINB4P48594 390 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 CDH4P55283 916 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 PPARDQ03181 441 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 ACTN3Q08043 901 aaPredicted RBP10.57□□□□□ -0.72
VPS25-203ENST00000589520 POLD3Q15054 466 aaPredicted RBP10.57□□□□□ -0.72
VPS25-203ENST00000589520 PABPC1LQ4VXU2 614 aaKnown RBP10.57□□□□□ -0.72
VPS25-203ENST00000589520 SPOUT1Q5T280 376 aaKnown RBP10.57□□□□□ -0.72
VPS25-203ENST00000589520 PRSS55Q6UWB4 352 aaPredicted RBP10.57□□□□□ -0.72
VPS25-203ENST00000589520 RANBP10Q6VN20 620 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 CHST9Q7L1S5 443 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 CCDC91Q7Z6B0 441 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 RASSF3Q86WH2 238 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 HERC6Q8IVU3 1022 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 LMNTD2Q8IXW0 634 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 NDUFAF2Q8N183 169 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 TMEM199Q8N511 208 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 PEX13Q92968 403 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 ZNF669Q96BR6 464 aaPredicted RBP10.57□□□□□ -0.72
VPS25-203ENST00000589520 ZNF333Q96JL9 665 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 B3GALT6Q96L58 329 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 RPRD1AQ96P16 312 aaPredicted RBP10.57□□□□□ -0.72
VPS25-203ENST00000589520 CLSTN3Q9BQT9 956 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 SIKE1Q9BRV8 207 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 NACA2Q9H009 215 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 C11orf49Q9H6J7 331 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 SP110Q9HB58 689 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 RXFP1Q9HBX9 757 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 SPG21Q9NZD8 308 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 MPP6Q9NZW5 540 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 MID2Q9UJV3 735 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 ASB3Q9Y575 518 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 PLXNA3P51805 1871 aa10.57□□□□□ -0.72
VPS25-203ENST00000589520 HEATR9A2RTY3 570 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 GOLGA8RI6L899 631 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 KIAA0355O15063 1070 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 ATP9BO43861 1147 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 CLDN11O75508 207 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 PAPSS2O95340 614 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms