RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 PCDHB4Q9Y5E5 795 aa22.35■■□□□ 1.17
CAPNS1-205ENST00000588780 TCAF2A6NFQ2 919 aa22.34■■□□□ 1.17
CAPNS1-205ENST00000588780 SART1O43290 800 aaKnown RBP22.34■■□□□ 1.17
CAPNS1-205ENST00000588780 AQP9O43315 295 aa22.34■■□□□ 1.17
CAPNS1-205ENST00000588780 LZTS3O60299 673 aaPredicted RBP22.34■■□□□ 1.17
CAPNS1-205ENST00000588780 TCEA3O75764 348 aa22.34■■□□□ 1.17
CAPNS1-205ENST00000588780 FYNP06241 537 aa22.34■■□□□ 1.17
CAPNS1-205ENST00000588780 BRD2P25440 801 aaKnown RBP22.34■■□□□ 1.17
CAPNS1-205ENST00000588780 MLLT3P42568 568 aaPredicted RBP22.34■■□□□ 1.17
CAPNS1-205ENST00000588780 PLK1P53350 603 aa22.34■■□□□ 1.17
CAPNS1-205ENST00000588780 SPIDRQ14159 915 aa22.34■■□□□ 1.17
CAPNS1-205ENST00000588780 CBWD6Q4V339 395 aa22.34■■□□□ 1.17
CAPNS1-205ENST00000588780 CBWD3Q5JTY5 395 aa22.34■■□□□ 1.17
CAPNS1-205ENST00000588780 CBWD5Q5RIA9 395 aa22.34■■□□□ 1.17
CAPNS1-205ENST00000588780 SEL1L3Q68CR1 1132 aa22.34■■□□□ 1.17
CAPNS1-205ENST00000588780 XKR5Q6UX68 686 aa22.34■■□□□ 1.17
CAPNS1-205ENST00000588780 ABI3BPQ7Z7G0 1075 aa22.34■■□□□ 1.17
CAPNS1-205ENST00000588780 CLEC14AQ86T13 490 aa22.34■■□□□ 1.17
CAPNS1-205ENST00000588780 FAM174AQ8TBP5 190 aa22.34■■□□□ 1.17
CAPNS1-205ENST00000588780 GLMNQ92990 594 aa22.34■■□□□ 1.17
CAPNS1-205ENST00000588780 SGF29Q96ES7 293 aa22.34■■□□□ 1.17
CAPNS1-205ENST00000588780 SEPT3Q9UH03 358 aa22.34■■□□□ 1.17
CAPNS1-205ENST00000588780 AHCTF1Q8WYP5 2266 aa22.33■■□□□ 1.17
CAPNS1-205ENST00000588780 KIF26BQ2KJY2 2108 aa22.33■■□□□ 1.17
CAPNS1-205ENST00000588780 CETN3O15182 167 aa22.33■■□□□ 1.17
CAPNS1-205ENST00000588780 MYL1P05976 194 aa22.33■■□□□ 1.17
CAPNS1-205ENST00000588780 ITGA2BP08514 1039 aa22.33■■□□□ 1.17
CAPNS1-205ENST00000588780 PAEPP09466 180 aa22.33■■□□□ 1.17
CAPNS1-205ENST00000588780 FAM87AP0C7U9 286 aa22.33■■□□□ 1.17
CAPNS1-205ENST00000588780 TBXAS1P24557 533 aaPredicted RBP22.33■■□□□ 1.17
CAPNS1-205ENST00000588780 CHRNA3P32297 505 aa22.33■■□□□ 1.17
CAPNS1-205ENST00000588780 RPIAP49247 311 aa22.33■■□□□ 1.17
CAPNS1-205ENST00000588780 DRAP1Q14919 205 aaPredicted RBP22.33■■□□□ 1.17
CAPNS1-205ENST00000588780 CNGA2Q16280 664 aa22.33■■□□□ 1.17
CAPNS1-205ENST00000588780 TTC39BQ5VTQ0 682 aaPredicted RBP22.33■■□□□ 1.17
CAPNS1-205ENST00000588780 SYPL2Q5VXT5 272 aa22.33■■□□□ 1.17
CAPNS1-205ENST00000588780 PARGQ86W56 976 aa22.33■■□□□ 1.17
CAPNS1-205ENST00000588780 RPRD1AQ96P16 312 aaPredicted RBP22.33■■□□□ 1.17
CAPNS1-205ENST00000588780 TRIM62Q9BVG3 475 aa22.33■■□□□ 1.17
CAPNS1-205ENST00000588780 STARD5Q9NSY2 213 aa22.33■■□□□ 1.17
CAPNS1-205ENST00000588780 CSNK1G3Q9Y6M4 447 aa22.33■■□□□ 1.17
CAPNS1-205ENST00000588780 SYNJ2BP-COX16A0A087WUM0 186 aa22.32■■□□□ 1.16
CAPNS1-205ENST00000588780 EME2A4GXA9 379 aaPredicted RBP22.32■■□□□ 1.16
CAPNS1-205ENST00000588780 CSF2P04141 144 aa22.32■■□□□ 1.16
CAPNS1-205ENST00000588780 SFTPCP11686 197 aa22.32■■□□□ 1.16
CAPNS1-205ENST00000588780 NME1P15531 152 aaKnown RBP22.32■■□□□ 1.16
CAPNS1-205ENST00000588780 JUNDP17535 347 aa22.32■■□□□ 1.16
CAPNS1-205ENST00000588780 INHBCP55103 352 aa22.32■■□□□ 1.16
CAPNS1-205ENST00000588780 FZD2Q14332 565 aa22.32■■□□□ 1.16
CAPNS1-205ENST00000588780 STILQ15468 1287 aa22.32■■□□□ 1.16
CAPNS1-205ENST00000588780 PERM1Q5SV97 790 aa22.32■■□□□ 1.16
CAPNS1-205ENST00000588780 GUF1Q8N442 669 aaKnown RBP22.32■■□□□ 1.16
CAPNS1-205ENST00000588780 SH2D3CQ8N5H7 860 aa22.32■■□□□ 1.16
CAPNS1-205ENST00000588780 ATP11CQ8NB49 1132 aa22.32■■□□□ 1.16
CAPNS1-205ENST00000588780 FEM1AQ9BSK4 669 aa22.32■■□□□ 1.16
CAPNS1-205ENST00000588780 MUC3BQ9H195 1237 aa22.32■■□□□ 1.16
CAPNS1-205ENST00000588780 EPB41L5Q9HCM4 733 aa22.32■■□□□ 1.16
CAPNS1-205ENST00000588780 COX16Q9P0S2 106 aa22.32■■□□□ 1.16
CAPNS1-205ENST00000588780 USP25Q9UHP3 1055 aa22.32■■□□□ 1.16
CAPNS1-205ENST00000588780 SALL4Q9UJQ4 1053 aa22.32■■□□□ 1.16
CAPNS1-205ENST00000588780 ZFR2Q9UPR6 939 aaKnown RBP22.32■■□□□ 1.16
CAPNS1-205ENST00000588780 HS3ST3A1Q9Y663 406 aa22.32■■□□□ 1.16
CAPNS1-205ENST00000588780 A0A1B0GVL5 298 aa22.31■■□□□ 1.16
CAPNS1-205ENST00000588780 KCNU1A8MYU2 1149 aa22.31■■□□□ 1.16
CAPNS1-205ENST00000588780 RIOK3O14730 519 aaKnown RBP22.31■■□□□ 1.16
CAPNS1-205ENST00000588780 EFSO43281 561 aa22.31■■□□□ 1.16
CAPNS1-205ENST00000588780 SUV39H1O43463 412 aa22.31■■□□□ 1.16
CAPNS1-205ENST00000588780 RHOBTB3O94955 611 aa22.31■■□□□ 1.16
CAPNS1-205ENST00000588780 TRUB2O95900 331 aaKnown RBP22.31■■□□□ 1.16
CAPNS1-205ENST00000588780 CALCAP01258 141 aa22.31■■□□□ 1.16
CAPNS1-205ENST00000588780 CTSLP07711 333 aa22.31■■□□□ 1.16
CAPNS1-205ENST00000588780 SLC5A2P31639 672 aa22.31■■□□□ 1.16
CAPNS1-205ENST00000588780 CENPCQ03188 943 aa22.31■■□□□ 1.16
CAPNS1-205ENST00000588780 CXorf57Q6NSI4 855 aaKnown RBP22.31■■□□□ 1.16
CAPNS1-205ENST00000588780 ERN2Q76MJ5 926 aaKnown RBP22.31■■□□□ 1.16
CAPNS1-205ENST00000588780 C14orf80Q86SX3 495 aa22.31■■□□□ 1.16
CAPNS1-205ENST00000588780 WDR48Q8TAF3 677 aa22.31■■□□□ 1.16
CAPNS1-205ENST00000588780 GRIN3AQ8TCU5 1115 aa22.31■■□□□ 1.16
CAPNS1-205ENST00000588780 FAM204AQ9H8W3 233 aa22.31■■□□□ 1.16
CAPNS1-205ENST00000588780 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.31■■□□□ 1.16
CAPNS1-205ENST00000588780 ANKMY1Q9P2S6 941 aa22.31■■□□□ 1.16
CAPNS1-205ENST00000588780 SPTY2D1-AS1A0A0U1RR47 76 aa22.3■■□□□ 1.16
CAPNS1-205ENST00000588780 POM121BA6NF01 834 aa22.3■■□□□ 1.16
CAPNS1-205ENST00000588780 PAK4O96013 591 aaPredicted RBP22.3■■□□□ 1.16
CAPNS1-205ENST00000588780 PRNPP04156 253 aa22.3■■□□□ 1.16
CAPNS1-205ENST00000588780 ITGB2P05107 769 aa22.3■■□□□ 1.16
CAPNS1-205ENST00000588780 VASPP50552 380 aaPredicted RBP22.3■■□□□ 1.16
CAPNS1-205ENST00000588780 PDE1CQ14123 709 aaPredicted RBP22.3■■□□□ 1.16
CAPNS1-205ENST00000588780 TGIF1Q15583 401 aa22.3■■□□□ 1.16
CAPNS1-205ENST00000588780 KYAT3Q6YP21 454 aaKnown RBP22.3■■□□□ 1.16
CAPNS1-205ENST00000588780 FBXO39Q8N4B4 442 aa22.3■■□□□ 1.16
CAPNS1-205ENST00000588780 NAT6Q93015 286 aa22.3■■□□□ 1.16
CAPNS1-205ENST00000588780 BMFQ96LC9 184 aa22.3■■□□□ 1.16
CAPNS1-205ENST00000588780 SLC17A9Q9BYT1 436 aa22.3■■□□□ 1.16
CAPNS1-205ENST00000588780 PLD2O14939 933 aa22.29■■□□□ 1.16
CAPNS1-205ENST00000588780 AFPP02771 609 aaKnown RBP22.29■■□□□ 1.16
CAPNS1-205ENST00000588780 PRR29P0C7W0 189 aa22.29■■□□□ 1.16
CAPNS1-205ENST00000588780 PFKFB1P16118 471 aa22.29■■□□□ 1.16
CAPNS1-205ENST00000588780 RECQLP46063 649 aaPredicted RBP22.29■■□□□ 1.16
CAPNS1-205ENST00000588780 RABIFP47224 123 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms