RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 PTPN20Q4JDL3 420 aa18.89■□□□□ 0.61
CCDC43-204ENST00000588687 ALFQ53S48 1182 aa18.89■□□□□ 0.61
CCDC43-204ENST00000588687 EFHC1Q5JVL4 640 aa18.89■□□□□ 0.61
CCDC43-204ENST00000588687 GCNT7Q6ZNI0 430 aa18.89■□□□□ 0.61
CCDC43-204ENST00000588687 C1orf131Q8NDD1 294 aaKnown RBP18.89■□□□□ 0.61
CCDC43-204ENST00000588687 FCRL3Q96P31 734 aaPredicted RBP18.89■□□□□ 0.61
CCDC43-204ENST00000588687 MYOCQ99972 504 aa18.89■□□□□ 0.61
CCDC43-204ENST00000588687 CRACR2AQ9BSW2 395 aa18.89■□□□□ 0.61
CCDC43-204ENST00000588687 SRRTQ9BXP5 876 aaKnown RBP18.89■□□□□ 0.61
CCDC43-204ENST00000588687 PIGVQ9NUD9 493 aa18.89■□□□□ 0.61
CCDC43-204ENST00000588687 VPS51Q9UID3 782 aa18.89■□□□□ 0.61
CCDC43-204ENST00000588687 ZFR2Q9UPR6 939 aaKnown RBP18.89■□□□□ 0.61
CCDC43-204ENST00000588687 PCDHB1Q9Y5F3 818 aa18.89■□□□□ 0.61
CCDC43-204ENST00000588687 U3KQA8 63 aa18.89■□□□□ 0.61
CCDC43-204ENST00000588687 TDRD6O60522 2096 aaKnown RBP18.89■□□□□ 0.61
CCDC43-204ENST00000588687 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.88■□□□□ 0.61
CCDC43-204ENST00000588687 A0A1W2PQU0 124 aa18.88■□□□□ 0.61
CCDC43-204ENST00000588687 K7ERQ8 282 aa18.88■□□□□ 0.61
CCDC43-204ENST00000588687 BIN1O00499 593 aa18.88■□□□□ 0.61
CCDC43-204ENST00000588687 THEGLP0DJG4 465 aa18.88■□□□□ 0.61
CCDC43-204ENST00000588687 SLC9A1P19634 815 aa18.88■□□□□ 0.61
CCDC43-204ENST00000588687 CDH4P55283 916 aa18.88■□□□□ 0.61
CCDC43-204ENST00000588687 KCNMA1Q12791 1236 aa18.88■□□□□ 0.61
CCDC43-204ENST00000588687 ZNF177Q13360 481 aaPredicted RBP18.88■□□□□ 0.61
CCDC43-204ENST00000588687 TMEM259Q4ZIN3 620 aa18.88■□□□□ 0.61
CCDC43-204ENST00000588687 CDCP2Q5VXM1 449 aa18.88■□□□□ 0.61
CCDC43-204ENST00000588687 HORMAD1Q86X24 394 aa18.88■□□□□ 0.61
CCDC43-204ENST00000588687 ZNF397Q8NF99 534 aaPredicted RBP18.88■□□□□ 0.61
CCDC43-204ENST00000588687 OR13H1Q8NG92 308 aa18.88■□□□□ 0.61
CCDC43-204ENST00000588687 SLC39A7Q92504 469 aa18.88■□□□□ 0.61
CCDC43-204ENST00000588687 BAP1Q92560 729 aa18.88■□□□□ 0.61
CCDC43-204ENST00000588687 FGF11Q92914 225 aa18.88■□□□□ 0.61
CCDC43-204ENST00000588687 KLHDC7BQ96G42 594 aa18.88■□□□□ 0.61
CCDC43-204ENST00000588687 NOX5Q96PH1 765 aa18.88■□□□□ 0.61
CCDC43-204ENST00000588687 FZD3Q9NPG1 666 aa18.88■□□□□ 0.61
CCDC43-204ENST00000588687 KLHL11Q9NVR0 708 aa18.88■□□□□ 0.61
CCDC43-204ENST00000588687 ARHGEF38Q9NXL2 777 aa18.88■□□□□ 0.61
CCDC43-204ENST00000588687 APEX2Q9UBZ4 518 aa18.88■□□□□ 0.61
CCDC43-204ENST00000588687 ZNF212Q9UDV6 495 aa18.88■□□□□ 0.61
CCDC43-204ENST00000588687 EIF4E1BA6NMX2 242 aaKnown RBP18.87■□□□□ 0.61
CCDC43-204ENST00000588687 SLC31A1O15431 190 aa18.87■□□□□ 0.61
CCDC43-204ENST00000588687 RRP8O43159 456 aaKnown RBP18.87■□□□□ 0.61
CCDC43-204ENST00000588687 SMAD6O43541 496 aaKnown RBP18.87■□□□□ 0.61
CCDC43-204ENST00000588687 PIAS2O75928 621 aa18.87■□□□□ 0.61
CCDC43-204ENST00000588687 ADCY5O95622 1261 aa18.87■□□□□ 0.61
CCDC43-204ENST00000588687 NME3Q13232 169 aa18.87■□□□□ 0.61
CCDC43-204ENST00000588687 MTA1Q13330 715 aa18.87■□□□□ 0.61
CCDC43-204ENST00000588687 NEK5Q6P3R8 708 aa18.87■□□□□ 0.61
CCDC43-204ENST00000588687 LRRC69Q6ZNQ3 347 aa18.87■□□□□ 0.61
CCDC43-204ENST00000588687 C11orf57Q6ZUT1 292 aaPredicted RBP18.87■□□□□ 0.61
CCDC43-204ENST00000588687 ABI3BPQ7Z7G0 1075 aa18.87■□□□□ 0.61
CCDC43-204ENST00000588687 DCAF4L2Q8NA75 395 aa18.87■□□□□ 0.61
CCDC43-204ENST00000588687 CHST14Q8NCH0 376 aa18.87■□□□□ 0.61
CCDC43-204ENST00000588687 KLK6Q92876 244 aa18.87■□□□□ 0.61
CCDC43-204ENST00000588687 RNF34Q969K3 372 aa18.87■□□□□ 0.61
CCDC43-204ENST00000588687 NT5C3BQ969T7 300 aa18.87■□□□□ 0.61
CCDC43-204ENST00000588687 PPP1R9BQ96SB3 815 aa18.87■□□□□ 0.61
CCDC43-204ENST00000588687 NPY6RQ99463 290 aa18.87■□□□□ 0.61
CCDC43-204ENST00000588687 TRPM6Q9BX84 2022 aa18.86■□□□□ 0.61
CCDC43-204ENST00000588687 CHD5Q8TDI0 1954 aa18.86■□□□□ 0.61
CCDC43-204ENST00000588687 A0A0D9SEW6 157 aa18.86■□□□□ 0.61
CCDC43-204ENST00000588687 ZNF821O75541 412 aaPredicted RBP18.86■□□□□ 0.61
CCDC43-204ENST00000588687 MT-CO3P00414 261 aa18.86■□□□□ 0.61
CCDC43-204ENST00000588687 CKMT1AP12532 417 aa18.86■□□□□ 0.61
CCDC43-204ENST00000588687 RRM1P23921 792 aa18.86■□□□□ 0.61
CCDC43-204ENST00000588687 CHRNA3P32297 505 aa18.86■□□□□ 0.61
CCDC43-204ENST00000588687 NOS2P35228 1153 aa18.86■□□□□ 0.61
CCDC43-204ENST00000588687 CXCR3P49682 368 aa18.86■□□□□ 0.61
CCDC43-204ENST00000588687 ARHGAP44Q17R89 818 aa18.86■□□□□ 0.61
CCDC43-204ENST00000588687 SEL1L3Q68CR1 1132 aa18.86■□□□□ 0.61
CCDC43-204ENST00000588687 SPACA3Q8IXA5 215 aa18.86■□□□□ 0.61
CCDC43-204ENST00000588687 TMIEQ8NEW7 156 aa18.86■□□□□ 0.61
CCDC43-204ENST00000588687 HIC2Q96JB3 615 aa18.86■□□□□ 0.61
CCDC43-204ENST00000588687 MUC3BQ9H195 1237 aa18.86■□□□□ 0.61
CCDC43-204ENST00000588687 SIX2Q9NPC8 291 aa18.86■□□□□ 0.61
CCDC43-204ENST00000588687 SNX10Q9Y5X0 201 aa18.86■□□□□ 0.61
CCDC43-204ENST00000588687 IGLV3-10A0A075B6K4 115 aa18.85■□□□□ 0.61
CCDC43-204ENST00000588687 M0QYT0 321 aa18.85■□□□□ 0.61
CCDC43-204ENST00000588687 KPNA3O00505 521 aaPredicted RBP18.85■□□□□ 0.61
CCDC43-204ENST00000588687 BNIP3LO60238 219 aa18.85■□□□□ 0.61
CCDC43-204ENST00000588687 LZTS3O60299 673 aaPredicted RBP18.85■□□□□ 0.61
CCDC43-204ENST00000588687 ZNF18P17022 549 aa18.85■□□□□ 0.61
CCDC43-204ENST00000588687 HNRNPA2B1P22626 353 aaKnown RBP18.85■□□□□ 0.61
CCDC43-204ENST00000588687 CLCN6P51797 869 aa18.85■□□□□ 0.61
CCDC43-204ENST00000588687 CLDN2P57739 230 aa18.85■□□□□ 0.61
CCDC43-204ENST00000588687 E2F1Q01094 437 aa18.85■□□□□ 0.61
CCDC43-204ENST00000588687 SLC6A3Q01959 620 aa18.85■□□□□ 0.61
CCDC43-204ENST00000588687 FGL2Q14314 439 aa18.85■□□□□ 0.61
CCDC43-204ENST00000588687 SMYD5Q6GMV2 418 aa18.85■□□□□ 0.61
CCDC43-204ENST00000588687 C22orf39Q6P5X5 142 aa18.85■□□□□ 0.61
CCDC43-204ENST00000588687 KDM7AQ6ZMT4 941 aa18.85■□□□□ 0.61
CCDC43-204ENST00000588687 IRF2BP1Q8IU81 584 aa18.85■□□□□ 0.61
CCDC43-204ENST00000588687 LSM14AQ8ND56 463 aaKnown RBP18.85■□□□□ 0.61
CCDC43-204ENST00000588687 PGAP3Q96FM1 320 aaPredicted RBP18.85■□□□□ 0.61
CCDC43-204ENST00000588687 FAM81BQ96LP2 452 aa18.85■□□□□ 0.61
CCDC43-204ENST00000588687 C2orf49Q9BVC5 232 aaPredicted RBP18.85■□□□□ 0.61
CCDC43-204ENST00000588687 HDAC8Q9BY41 377 aa18.85■□□□□ 0.61
CCDC43-204ENST00000588687 TKTL2Q9H0I9 626 aa18.85■□□□□ 0.61
CCDC43-204ENST00000588687 SIK2Q9H0K1 926 aa18.85■□□□□ 0.61
CCDC43-204ENST00000588687 TMPRSS4Q9NRS4 437 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms