RNA–Protein interactions for RNA: ENST00000588019.1

NLE1-204, Transcript of notchless homolog 1, humanhuman

TSL 5

Gene NLE1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-204ENST00000588019 PRUNE1Q86TP1 453 aa16.52■□□□□ 0.24
NLE1-204ENST00000588019 ZNF567Q8N184 647 aa16.52■□□□□ 0.24
NLE1-204ENST00000588019 BBS5Q8N3I7 341 aa16.52■□□□□ 0.24
NLE1-204ENST00000588019 ACDQ96AP0 544 aa16.52■□□□□ 0.24
NLE1-204ENST00000588019 LMLNQ96KR4 655 aa16.52■□□□□ 0.24
NLE1-204ENST00000588019 TEKT5Q96M29 485 aa16.52■□□□□ 0.24
NLE1-204ENST00000588019 PNKPQ96T60 521 aa16.52■□□□□ 0.24
NLE1-204ENST00000588019 HINFPQ9BQA5 517 aa16.52■□□□□ 0.24
NLE1-204ENST00000588019 PDFQ9HBH1 243 aa16.52■□□□□ 0.24
NLE1-204ENST00000588019 HPS4Q9NQG7 708 aa16.52■□□□□ 0.24
NLE1-204ENST00000588019 UBA2Q9UBT2 640 aaPredicted RBP16.52■□□□□ 0.24
NLE1-204ENST00000588019 FBXO10Q9UK96 956 aa16.52■□□□□ 0.24
NLE1-204ENST00000588019 RAB21Q9UL25 225 aa16.52■□□□□ 0.24
NLE1-204ENST00000588019 CLEC4EQ9ULY5 219 aa16.52■□□□□ 0.24
NLE1-204ENST00000588019 NUMBLQ9Y6R0 609 aa16.52■□□□□ 0.24
NLE1-204ENST00000588019 ESYT3A0FGR9 886 aa16.51■□□□□ 0.23
NLE1-204ENST00000588019 C2CD4DB7Z1M9 353 aa16.51■□□□□ 0.23
NLE1-204ENST00000588019 SMAPO00193 183 aa16.51■□□□□ 0.23
NLE1-204ENST00000588019 CBX4O00257 560 aa16.51■□□□□ 0.23
NLE1-204ENST00000588019 DNALI1O14645 258 aaPredicted RBP16.51■□□□□ 0.23
NLE1-204ENST00000588019 PEX11BO96011 259 aa16.51■□□□□ 0.23
NLE1-204ENST00000588019 PABPC1P11940 636 aaKnown RBP16.51■□□□□ 0.23
NLE1-204ENST00000588019 HLA-FP30511 346 aa16.51■□□□□ 0.23
NLE1-204ENST00000588019 CD70P32970 193 aa16.51■□□□□ 0.23
NLE1-204ENST00000588019 NRLP54845 237 aa16.51■□□□□ 0.23
NLE1-204ENST00000588019 TNK2Q07912 1038 aa16.51■□□□□ 0.23
NLE1-204ENST00000588019 ZBTB17Q13105 803 aa16.51■□□□□ 0.23
NLE1-204ENST00000588019 PARP6Q2NL67 630 aa16.51■□□□□ 0.23
NLE1-204ENST00000588019 PLEKHG6Q3KR16 790 aa16.51■□□□□ 0.23
NLE1-204ENST00000588019 RETSATQ6NUM9 610 aa16.51■□□□□ 0.23
NLE1-204ENST00000588019 TEX26Q8N6G2 289 aa16.51■□□□□ 0.23
NLE1-204ENST00000588019 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.51■□□□□ 0.23
NLE1-204ENST00000588019 ST13P5Q8NFI4 369 aaPredicted RBP16.51■□□□□ 0.23
NLE1-204ENST00000588019 CASKIN2Q8WXE0 1202 aa16.51■□□□□ 0.23
NLE1-204ENST00000588019 IFT81Q8WYA0 676 aa16.51■□□□□ 0.23
NLE1-204ENST00000588019 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.51■□□□□ 0.23
NLE1-204ENST00000588019 PPP1R2P1Q96PQ5 205 aa16.51■□□□□ 0.23
NLE1-204ENST00000588019 ABCB8Q9NUT2 735 aa16.51■□□□□ 0.23
NLE1-204ENST00000588019 RBM22Q9NW64 420 aaKnown RBP eCLIP16.51■□□□□ 0.23
NLE1-204ENST00000588019 IGSF9Q9P2J2 1179 aa16.51■□□□□ 0.23
NLE1-204ENST00000588019 GGA2Q9UJY4 613 aa16.51■□□□□ 0.23
NLE1-204ENST00000588019 TPX2Q9ULW0 747 aaKnown RBP16.51■□□□□ 0.23
NLE1-204ENST00000588019 LAMA3Q16787 3333 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 ZBTB24O43167 697 aaPredicted RBP16.5■□□□□ 0.23
NLE1-204ENST00000588019 ZMPSTE24O75844 475 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 SEC31AO94979 1220 aaKnown RBP16.5■□□□□ 0.23
NLE1-204ENST00000588019 SP100P23497 879 aaPredicted RBP16.5■□□□□ 0.23
NLE1-204ENST00000588019 MMP13P45452 471 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 DGKGP49619 791 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 SULT2A1Q06520 285 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 SLC20A2Q08357 652 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 HLTFQ14527 1009 aaKnown RBP eCLIP16.5■□□□□ 0.23
NLE1-204ENST00000588019 LBRQ14739 615 aaKnown RBP16.5■□□□□ 0.23
NLE1-204ENST00000588019 INO80DQ53TQ3 878 aaPredicted RBP16.5■□□□□ 0.23
NLE1-204ENST00000588019 PITRM1Q5JRX3 1037 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 IZUMO3Q5VZ72 239 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 CCNI2Q6ZMN8 369 aaPredicted RBP16.5■□□□□ 0.23
NLE1-204ENST00000588019 KIAA0907Q7Z7F0 614 aaPredicted RBP16.5■□□□□ 0.23
NLE1-204ENST00000588019 METTL3Q86U44 580 aaKnown RBP16.5■□□□□ 0.23
NLE1-204ENST00000588019 APCDD1Q8J025 514 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 AHI1Q8N157 1196 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 NAT16Q8N8M0 369 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 WFIKKN2Q8TEU8 576 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 USP33Q8TEY7 942 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 AGAP3Q96P47 875 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 RPP25Q9BUL9 199 aaKnown RBP16.5■□□□□ 0.23
NLE1-204ENST00000588019 BRD9Q9H8M2 597 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 RAB6BQ9NRW1 208 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 DNAJC17Q9NVM6 304 aaKnown RBP16.5■□□□□ 0.23
NLE1-204ENST00000588019 GRHL1Q9NZI5 618 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 SEPT3Q9UH03 358 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 RSPH14Q9UHP6 348 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 VPS51Q9UID3 782 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 ANAPC5Q9UJX4 755 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 SLC27A6Q9Y2P4 619 aa16.5■□□□□ 0.23
NLE1-204ENST00000588019 CARSP49589 748 aaKnown RBP16.49■□□□□ 0.23
NLE1-204ENST00000588019 VSNL1P62760 191 aa16.49■□□□□ 0.23
NLE1-204ENST00000588019 BASP1P80723 227 aaKnown RBP16.49■□□□□ 0.23
NLE1-204ENST00000588019 SLC10A7Q0GE19 358 aa16.49■□□□□ 0.23
NLE1-204ENST00000588019 PRPSAP1Q14558 356 aa16.49■□□□□ 0.23
NLE1-204ENST00000588019 ZNF235Q14590 738 aa16.49■□□□□ 0.23
NLE1-204ENST00000588019 KCTD19Q17RG1 926 aaPredicted RBP16.49■□□□□ 0.23
NLE1-204ENST00000588019 ITPRIPL2Q3MIP1 535 aa16.49■□□□□ 0.23
NLE1-204ENST00000588019 PREPLQ4J6C6 727 aaPredicted RBP16.49■□□□□ 0.23
NLE1-204ENST00000588019 ASTLQ6HA08 431 aaPredicted RBP16.49■□□□□ 0.23
NLE1-204ENST00000588019 PTCRAQ6ISU1 281 aaPredicted RBP16.49■□□□□ 0.23
NLE1-204ENST00000588019 HOOK3Q86VS8 718 aa16.49■□□□□ 0.23
NLE1-204ENST00000588019 ETFBKMTQ8IXQ9 262 aa16.49■□□□□ 0.23
NLE1-204ENST00000588019 PPIL6Q8IXY8 311 aa16.49■□□□□ 0.23
NLE1-204ENST00000588019 CNTD1Q8N815 330 aa16.49■□□□□ 0.23
NLE1-204ENST00000588019 ART4Q93070 314 aa16.49■□□□□ 0.23
NLE1-204ENST00000588019 CEP41Q9BYV8 373 aa16.49■□□□□ 0.23
NLE1-204ENST00000588019 GBA3Q9H227 469 aa16.49■□□□□ 0.23
NLE1-204ENST00000588019 ETNK1Q9HBU6 452 aa16.49■□□□□ 0.23
NLE1-204ENST00000588019 DEC1Q9P2X7 70 aa16.49■□□□□ 0.23
NLE1-204ENST00000588019 INTS6Q9UL03 887 aaKnown RBP16.49■□□□□ 0.23
NLE1-204ENST00000588019 ATP8A1Q9Y2Q0 1164 aa16.49■□□□□ 0.23
NLE1-204ENST00000588019 GOLGA6CA6NDK9 693 aa16.48■□□□□ 0.23
NLE1-204ENST00000588019 GOLGA6BA6NDN3 693 aa16.48■□□□□ 0.23
NLE1-204ENST00000588019 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms