RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 NOA1Q8NC60 698 aaKnown RBP8.08□□□□□ -1.12
VMP1-204ENST00000587259 LRRN4CLQ8ND94 238 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 C1orf131Q8NDD1 294 aaKnown RBP8.08□□□□□ -1.12
VMP1-204ENST00000587259 STK32AQ8WU08 396 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 OVCA2Q8WZ82 227 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 SNX19Q92543 992 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 OTUB2Q96DC9 234 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 C18orf8Q96DM3 657 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 RBM41Q96IZ5 413 aaKnown RBP8.08□□□□□ -1.12
VMP1-204ENST00000587259 HEXIM2Q96MH2 286 aaKnown RBP8.08□□□□□ -1.12
VMP1-204ENST00000587259 PSMB7Q99436 277 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 RHOXF2Q9BQY4 288 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 FAM129AQ9BZQ8 928 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 RAB17Q9H0T7 212 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 CCDC86Q9H6F5 360 aaKnown RBP8.08□□□□□ -1.12
VMP1-204ENST00000587259 GAREM1Q9H706 876 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 ANKZF1Q9H8Y5 726 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 ACP6Q9NPH0 428 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 DDX56Q9NY93 547 aaKnown RBP8.08□□□□□ -1.12
VMP1-204ENST00000587259 WSB2Q9NYS7 404 aaPredicted RBP8.08□□□□□ -1.12
VMP1-204ENST00000587259 EIF2B4Q9UI10 523 aaKnown RBP8.08□□□□□ -1.12
VMP1-204ENST00000587259 TMEM59LQ9UK28 342 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 PCOLCE2Q9UKZ9 415 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 PACSIN2Q9UNF0 486 aaPredicted RBP8.08□□□□□ -1.12
VMP1-204ENST00000587259 STARD13Q9Y3M8 1113 aa8.08□□□□□ -1.12
VMP1-204ENST00000587259 FAM92AA1XBS5 289 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 SIGLEC16A6NMB1 481 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 TMEM110-MUSTN1A8MSY1 372 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 H0Y626 953 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 CBX4O00257 560 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 PDE2AO00408 941 aaPredicted RBP8.07□□□□□ -1.12
VMP1-204ENST00000587259 NDC80O14777 642 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 STC2O76061 302 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 TRIM16O95361 564 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 FGGP02679 453 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 ERBB2P04626 1255 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 KRT7P08729 469 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 RARGP13631 454 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 CHRNA3P32297 505 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 ATP5C1P36542 298 aaKnown RBP8.07□□□□□ -1.12
VMP1-204ENST00000587259 ACADSBP45954 432 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 GABRB2P47870 512 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 TUBP50607 506 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 DNA2P51530 1060 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 TPMTP51580 245 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 BCAT1P54687 386 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 CYP4F3Q08477 520 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 PDCLQ13371 301 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 NNTQ13423 1086 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 NUMA1Q14980 2115 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 HADHQ16836 314 aaKnown RBP8.07□□□□□ -1.12
VMP1-204ENST00000587259 LONRF2Q1L5Z9 754 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 HLA-BQ31612 363 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 SYCP2LQ5T4T6 812 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 SWT1Q5T5J6 900 aaKnown RBP8.07□□□□□ -1.12
VMP1-204ENST00000587259 TMEM215Q68D42 235 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 EMBQ6PCB8 327 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 Q6ZNB5 142 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 CLEC20AQ6ZU45 233 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 POLNQ7Z5Q5 900 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 TMPRSS6Q8IU80 811 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 KATNAL2Q8IYT4 538 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 KIAA1958Q8N8K9 716 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 NDRG1Q92597 394 aaKnown RBP8.07□□□□□ -1.12
VMP1-204ENST00000587259 XPO6Q96QU8 1125 aaKnown RBP8.07□□□□□ -1.12
VMP1-204ENST00000587259 MTG2Q9H4K7 406 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 C6orf106Q9H6K1 298 aaPredicted RBP8.07□□□□□ -1.12
VMP1-204ENST00000587259 TLR8Q9NR97 1041 aaKnown RBP8.07□□□□□ -1.12
VMP1-204ENST00000587259 TM7SF3Q9NS93 570 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 MARK1Q9P0L2 795 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 USP36Q9P275 1121 aaKnown RBP8.07□□□□□ -1.12
VMP1-204ENST00000587259 FEZ2Q9UHY8 353 aaPredicted RBP8.07□□□□□ -1.12
VMP1-204ENST00000587259 UTP11Q9Y3A2 253 aaKnown RBP8.07□□□□□ -1.12
VMP1-204ENST00000587259 KNL1Q8NG31 2342 aa8.07□□□□□ -1.12
VMP1-204ENST00000587259 SETXQ7Z333 2677 aaKnown RBP8.06□□□□□ -1.12
VMP1-204ENST00000587259 PTPRBP23467 1997 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 ASXL3Q9C0F0 2248 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 ACACAQ13085 2346 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 A0A1B0GTW7 788 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 FAM187AA6NFU0 413 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 TMEM191CA6NGB0 347 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 BCAT2O15382 392 aaPredicted RBP8.06□□□□□ -1.12
VMP1-204ENST00000587259 ZBTB24O43167 697 aaPredicted RBP8.06□□□□□ -1.12
VMP1-204ENST00000587259 TSPAN3O60637 253 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 PHF2O75151 1096 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 RNF8O76064 485 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 FAM200BP0CF97 657 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 KRT3P12035 628 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 GNSP15586 552 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 CORO1AP31146 461 aaKnown RBP8.06□□□□□ -1.12
VMP1-204ENST00000587259 RDXP35241 583 aaKnown RBP8.06□□□□□ -1.12
VMP1-204ENST00000587259 DPP6P42658 865 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 FNTAP49354 379 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 COPAP53621 1224 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 BST2Q10589 180 aaKnown RBP8.06□□□□□ -1.12
VMP1-204ENST00000587259 EFEMP1Q12805 493 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 ZNF234Q14588 700 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 NAA30Q147X3 362 aaPredicted RBP8.06□□□□□ -1.12
VMP1-204ENST00000587259 KIF19Q2TAC6 998 aa8.06□□□□□ -1.12
VMP1-204ENST00000587259 WDR45BQ5MNZ6 344 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms