RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 VPS51Q9UID3 782 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 PCDHA3Q9Y5H8 950 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 HEY1Q9Y5J3 304 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 CAPN6Q9Y6Q1 641 aa14.17□□□□□ -0.14
TRAF4-215ENST00000584944 EDDM13A0A1B0GTR0 161 aa14.16□□□□□ -0.14
TRAF4-215ENST00000584944 TCRBV21S2A2A0A5A6 115 aa14.16□□□□□ -0.14
TRAF4-215ENST00000584944 MED19A0JLT2 244 aaPredicted RBP14.16□□□□□ -0.14
TRAF4-215ENST00000584944 ZNF487B1APH4 448 aa14.16□□□□□ -0.14
TRAF4-215ENST00000584944 SNAP91O60641 907 aa14.16□□□□□ -0.14
TRAF4-215ENST00000584944 APBB3O95704 486 aa14.16□□□□□ -0.14
TRAF4-215ENST00000584944 MX2P20592 715 aa14.16□□□□□ -0.14
TRAF4-215ENST00000584944 NRLP54845 237 aa14.16□□□□□ -0.14
TRAF4-215ENST00000584944 SEL1L2Q5TEA6 688 aa14.16□□□□□ -0.14
TRAF4-215ENST00000584944 TMEM215Q68D42 235 aa14.16□□□□□ -0.14
TRAF4-215ENST00000584944 LINGO4Q6UY18 593 aa14.16□□□□□ -0.14
TRAF4-215ENST00000584944 SPOCD1Q6ZMY3 1216 aa14.16□□□□□ -0.14
TRAF4-215ENST00000584944 DSG4Q86SJ6 1040 aa14.16□□□□□ -0.14
TRAF4-215ENST00000584944 RYBPQ8N488 228 aaPredicted RBP14.16□□□□□ -0.14
TRAF4-215ENST00000584944 PAF1Q8N7H5 531 aa14.16□□□□□ -0.14
TRAF4-215ENST00000584944 KDM1BQ8NB78 822 aa14.16□□□□□ -0.14
TRAF4-215ENST00000584944 CCNYQ8ND76 341 aa14.16□□□□□ -0.14
TRAF4-215ENST00000584944 EZH1Q92800 747 aaPredicted RBP14.16□□□□□ -0.14
TRAF4-215ENST00000584944 ERLEC1Q96DZ1 483 aa14.16□□□□□ -0.14
TRAF4-215ENST00000584944 HMCESQ96FZ2 354 aa14.16□□□□□ -0.14
TRAF4-215ENST00000584944 RNF157Q96PX1 679 aa14.16□□□□□ -0.14
TRAF4-215ENST00000584944 FERMT1Q9BQL6 677 aa14.16□□□□□ -0.14
TRAF4-215ENST00000584944 NDFIP2Q9NV92 336 aa14.16□□□□□ -0.14
TRAF4-215ENST00000584944 NCDNQ9UBB6 729 aa14.16□□□□□ -0.14
TRAF4-215ENST00000584944 INTS6Q9UL03 887 aaKnown RBP14.16□□□□□ -0.14
TRAF4-215ENST00000584944 PACSIN2Q9UNF0 486 aaPredicted RBP14.16□□□□□ -0.14
TRAF4-215ENST00000584944 SMG5Q9UPR3 1016 aaKnown RBP14.16□□□□□ -0.14
TRAF4-215ENST00000584944 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.16□□□□□ -0.14
TRAF4-215ENST00000584944 NCOR2Q9Y618 2525 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 SGK1O00141 431 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 KDELR3O43731 214 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 ACADMP11310 421 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 ACVRL1P37023 503 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 IL12RB1P42701 662 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 CTSOP43234 321 aaPredicted RBP14.15□□□□□ -0.14
TRAF4-215ENST00000584944 STK19P49842 368 aaPredicted RBP14.15□□□□□ -0.14
TRAF4-215ENST00000584944 PAPOLAP51003 745 aaKnown RBP14.15□□□□□ -0.14
TRAF4-215ENST00000584944 CLCN6P51797 869 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 SERINC3Q13530 473 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 CRY1Q16526 586 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 ZNF569Q5MCW4 686 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 LRRC49Q8IUZ0 686 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 GPR161Q8N6U8 529 aaKnown RBP14.15□□□□□ -0.14
TRAF4-215ENST00000584944 OR52K2Q8NGK3 314 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 PCDH19Q8TAB3 1148 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 FAM71BQ8TC56 605 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 HMGB4Q8WW32 186 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 TSC1Q92574 1164 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 KRT35Q92764 455 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 P3H4Q92791 437 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 LMLNQ96KR4 655 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 ACOX2Q99424 681 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 UBA2Q9UBT2 640 aaPredicted RBP14.15□□□□□ -0.14
TRAF4-215ENST00000584944 NEU3Q9UQ49 428 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 KIAA1549LQ6ZVL6 1849 aa14.15□□□□□ -0.14
TRAF4-215ENST00000584944 SPTBN2O15020 2390 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 TTC34A8MYJ7 566 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 WASH3PC4AMC7 463 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 PPP1R12AO14974 1030 aaPredicted RBP14.14□□□□□ -0.15
TRAF4-215ENST00000584944 DCLK1O15075 740 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 CST8O60676 142 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 TJP3O95049 919 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 HLA-EP13747 358 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 TGM1P22735 817 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 CDKN2BP42772 138 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 MARCKSL1P49006 195 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 SERPINH1P50454 418 aaKnown RBP14.14□□□□□ -0.15
TRAF4-215ENST00000584944 ARSEP51690 589 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 SATB1Q01826 763 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 SFSWAPQ12872 951 aaKnown RBP14.14□□□□□ -0.15
TRAF4-215ENST00000584944 LLGL1Q15334 1064 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 DLG2Q15700 870 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 RSPO4Q2I0M5 234 aaPredicted RBP14.14□□□□□ -0.15
TRAF4-215ENST00000584944 HNRNPA1L2Q32P51 320 aaKnown RBP14.14□□□□□ -0.15
TRAF4-215ENST00000584944 HEATR6Q6AI08 1181 aaKnown RBP14.14□□□□□ -0.15
TRAF4-215ENST00000584944 ANO7Q6IWH7 933 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 TIGD7Q6NT04 549 aaPredicted RBP14.14□□□□□ -0.15
TRAF4-215ENST00000584944 MFSD7Q6UXD7 560 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 LEKR1Q6ZMV7 388 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 CAMKK1Q8N5S9 505 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 ZNF366Q8N895 744 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 GANCQ8TET4 914 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 CASKIN2Q8WXE0 1202 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 HHIPQ96QV1 700 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 GABRG3Q99928 467 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 HEMGNQ9BXL5 484 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 SLC39A8Q9C0K1 460 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 FBRSQ9HAH7 460 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 ZNF212Q9UDV6 495 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 IPO11Q9UI26 975 aaKnown RBP14.14□□□□□ -0.15
TRAF4-215ENST00000584944 SLCO3A1Q9UIG8 710 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 HS3ST2Q9Y278 367 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 OR51B4Q9Y5P0 310 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 RAD54BQ9Y620 910 aa14.14□□□□□ -0.15
TRAF4-215ENST00000584944 TARSL2A2RTX5 802 aaKnown RBP14.13□□□□□ -0.15
TRAF4-215ENST00000584944 KCNK3O14649 394 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms