RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 MGEA5O60502 916 aa11.49□□□□□ -0.57
TOP3A-217ENST00000584582 SERPINE1P05121 402 aa11.49□□□□□ -0.57
TOP3A-217ENST00000584582 CHRNGP07510 517 aa11.49□□□□□ -0.57
TOP3A-217ENST00000584582 WARSP23381 471 aaKnown RBP11.49□□□□□ -0.57
TOP3A-217ENST00000584582 MPSTP25325 297 aa11.49□□□□□ -0.57
TOP3A-217ENST00000584582 PTPN7P35236 360 aa11.49□□□□□ -0.57
TOP3A-217ENST00000584582 ALDH7A1P49419 539 aaKnown RBP11.49□□□□□ -0.57
TOP3A-217ENST00000584582 PAPOLAP51003 745 aaKnown RBP11.49□□□□□ -0.57
TOP3A-217ENST00000584582 COPAP53621 1224 aa11.49□□□□□ -0.57
TOP3A-217ENST00000584582 DSC2Q02487 901 aa11.49□□□□□ -0.57
TOP3A-217ENST00000584582 WASHC5Q12768 1159 aa11.49□□□□□ -0.57
TOP3A-217ENST00000584582 MAPRE1Q15691 268 aaKnown RBP11.49□□□□□ -0.57
TOP3A-217ENST00000584582 LRRC8BQ6P9F7 803 aa11.49□□□□□ -0.57
TOP3A-217ENST00000584582 SCUBE1Q8IWY4 988 aa11.49□□□□□ -0.57
TOP3A-217ENST00000584582 BBS5Q8N3I7 341 aa11.49□□□□□ -0.57
TOP3A-217ENST00000584582 DCBLD1Q8N8Z6 715 aa11.49□□□□□ -0.57
TOP3A-217ENST00000584582 DBF4BQ8NFT6 615 aa11.49□□□□□ -0.57
TOP3A-217ENST00000584582 SPDL1Q96EA4 605 aa11.49□□□□□ -0.57
TOP3A-217ENST00000584582 FCRL3Q96P31 734 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-217ENST00000584582 TBL1YQ9BQ87 522 aa11.49□□□□□ -0.57
TOP3A-217ENST00000584582 TUBB6Q9BUF5 446 aa11.49□□□□□ -0.57
TOP3A-217ENST00000584582 SLC39A8Q9C0K1 460 aa11.49□□□□□ -0.57
TOP3A-217ENST00000584582 AAR2Q9Y312 384 aaKnown RBP11.49□□□□□ -0.57
TOP3A-217ENST00000584582 V9GYQ6 96 aa11.49□□□□□ -0.57
TOP3A-217ENST00000584582 BHMG1C9JSJ3 638 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-217ENST00000584582 MTSS1O43312 755 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 RAMP2O60895 175 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 YWHAQP27348 245 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 WNT3AP56704 352 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 KHDC1Q4VXA5 237 aaKnown RBP11.48□□□□□ -0.57
TOP3A-217ENST00000584582 SPDYAQ5MJ70 313 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 PAQR9Q6ZVX9 377 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 PCSK9Q8NBP7 692 aaKnown RBP11.48□□□□□ -0.57
TOP3A-217ENST00000584582 RBM15BQ8NDT2 890 aaKnown RBP11.48□□□□□ -0.57
TOP3A-217ENST00000584582 RSPH1Q8WYR4 309 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 OXCT2Q9BYC2 517 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-217ENST00000584582 ACE2Q9BYF1 805 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-217ENST00000584582 CCDC134Q9H6E4 229 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 BPIFA1Q9NP55 256 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 NDFIP2Q9NV92 336 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 GDAP2Q9NXN4 497 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 NDE1Q9NXR1 346 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 XPR1Q9UBH6 696 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 GIT1Q9Y2X7 761 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 FAM95CA0A1B0GW59 222 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 NVLO15381 856 aaKnown RBP11.48□□□□□ -0.57
TOP3A-217ENST00000584582 TPST1O60507 370 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 TRIM13O60858 407 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 RFPL1O75677 317 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 KCNE1P15382 129 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 SP3Q02447 781 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 TRIP10Q15642 601 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 NEPROQ6NW34 567 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 PRSS55Q6UWB4 352 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-217ENST00000584582 C14orf80Q86SX3 495 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 GALNT4Q8N4A0 578 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 DNAJC9Q8WXX5 260 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 ANLNQ9NQW6 1124 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 ABCC13Q9NSE7 274 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 TAS2R1Q9NYW7 299 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 ZMYND8Q9ULU4 1186 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-217ENST00000584582 PCDHB5Q9Y5E4 795 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 COL11A1P12107 1806 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-217ENST00000584582 DPYSL4O14531 572 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 TIMM44O43615 452 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 AMHP03971 560 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 FKBP1BP68106 108 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 HTRA3P83110 453 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 SEMG2Q02383 582 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 SEMA5AQ13591 1074 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 POLD3Q15054 466 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-217ENST00000584582 ZBTB6Q15916 424 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 SNX30Q5VWJ9 437 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 CYP4V2Q6ZWL3 525 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-217ENST00000584582 IFNLR1Q8IU57 520 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-217ENST00000584582 GSTCDQ8NEC7 633 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 ZMIZ2Q8NF64 920 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 SEMA3CQ99985 751 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 CADM1Q9BY67 442 aaKnown RBP11.48□□□□□ -0.57
TOP3A-217ENST00000584582 PIF1Q9H611 641 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 UXTQ9UBK9 157 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-217ENST00000584582 AK5Q9Y6K8 562 aa11.48□□□□□ -0.57
TOP3A-217ENST00000584582 FSCBQ5H9T9 825 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 RALGPS1Q5JS13 557 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 TMEM198Q66K66 360 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 SCIMPQ6UWF3 145 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 TMC7Q7Z402 723 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 RASAL3Q86YV0 1011 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 AFAP1L2Q8N4X5 818 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 ZNF781Q8N8C0 355 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 HDAC10Q969S8 669 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 PSMG2Q969U7 264 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 NXNL1Q96CM4 212 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 CCDC97Q96F63 343 aaPredicted RBP11.47□□□□□ -0.57
TOP3A-217ENST00000584582 CPNE1Q99829 537 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 HBS1LQ9Y450 684 aaKnown RBP11.47□□□□□ -0.57
TOP3A-217ENST00000584582 J3KR12 359 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 CLGNO14967 610 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 SEPT4O43236 478 aa11.47□□□□□ -0.57
TOP3A-217ENST00000584582 PLIN3O60664 434 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms