RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 CFAP69A5D8W1 941 aa16.69■□□□□ 0.26
CDK5RAP3-228ENST00000583363 PROB1E7EW31 1015 aa16.69■□□□□ 0.26
CDK5RAP3-228ENST00000583363 MATN3O15232 486 aa16.69■□□□□ 0.26
CDK5RAP3-228ENST00000583363 PRAMEF11O60813 436 aa16.69■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ZNF189O75820 626 aaPredicted RBP16.69■□□□□ 0.26
CDK5RAP3-228ENST00000583363 PEX11BO96011 259 aa16.69■□□□□ 0.26
CDK5RAP3-228ENST00000583363 PABPC1P11940 636 aaKnown RBP16.69■□□□□ 0.26
CDK5RAP3-228ENST00000583363 OPRD1P41143 372 aa16.69■□□□□ 0.26
CDK5RAP3-228ENST00000583363 DGKGP49619 791 aa16.69■□□□□ 0.26
CDK5RAP3-228ENST00000583363 TDGQ13569 410 aa16.69■□□□□ 0.26
CDK5RAP3-228ENST00000583363 PLEKHG6Q3KR16 790 aa16.69■□□□□ 0.26
CDK5RAP3-228ENST00000583363 PITRM1Q5JRX3 1037 aa16.69■□□□□ 0.26
CDK5RAP3-228ENST00000583363 TIGD7Q6NT04 549 aaPredicted RBP16.69■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ZNF354CQ86Y25 554 aa16.69■□□□□ 0.26
CDK5RAP3-228ENST00000583363 FAM71DQ8N9W8 422 aa16.69■□□□□ 0.26
CDK5RAP3-228ENST00000583363 GRK7Q8WTQ7 553 aa16.69■□□□□ 0.26
CDK5RAP3-228ENST00000583363 CHFRQ96EP1 664 aa16.69■□□□□ 0.26
CDK5RAP3-228ENST00000583363 DEC1Q9P2X7 70 aa16.69■□□□□ 0.26
CDK5RAP3-228ENST00000583363 VPS28Q9UK41 221 aa16.69■□□□□ 0.26
CDK5RAP3-228ENST00000583363 HPCAL4Q9UM19 191 aa16.69■□□□□ 0.26
CDK5RAP3-228ENST00000583363 PTPRZ1P23471 2315 aaPredicted RBP16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 KCNN4O15554 427 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 MTSS1O43312 755 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 SNAP91O60641 907 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 GLDCP23378 1020 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 EIF2DP41214 584 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 GDF10P55107 478 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 WASHC5Q12768 1159 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 DHX34Q14147 1143 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 GEN1Q17RS7 908 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 HEATR6Q6AI08 1181 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 GRAMD4Q6IC98 578 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ASCL5Q7RTU5 278 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 MAATS1Q7Z4T9 603 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ADIPOR2Q86V24 386 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 PHTF2Q8N3S3 785 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 DCAF4L2Q8NA75 395 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 MAML1Q92585 1016 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 DNASE1L2Q92874 299 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 TTC17Q96AE7 1141 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ACDQ96AP0 544 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 RTP4Q96DX8 246 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 CCDC114Q96M63 670 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 LRRC1Q9BTT6 524 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 SP110Q9HB58 689 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 PDFQ9HBH1 243 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 NEU2Q9Y3R4 380 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 DMDP11532 3685 aa16.68■□□□□ 0.26
CDK5RAP3-228ENST00000583363 A0A0A0MRY4 1105 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 CXorf51AA0A1B0GTR3 108 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 C5orf60A6NFR6 353 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ZSCAN5CA6NGD5 496 aaPredicted RBP16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 SGK1O00141 431 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 CBX4O00257 560 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 RAD51CO43502 376 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 NARSO43776 548 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 GCATO75600 419 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ECEL1O95672 775 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 CD160O95971 181 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 JCHAINP01591 159 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 CCNB1P14635 433 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ETS1P14921 441 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 PTPN3P26045 913 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 NUMBP49757 651 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 CLCN6P51797 869 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 IFI35P80217 286 aaPredicted RBP16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 MRPS25P82663 173 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ARF5P84085 180 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 DR1Q01658 176 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 SLC20A2Q08357 652 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 HNRNPDQ14103 355 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 FUT11Q495W5 492 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 GLE1Q53GS7 698 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 TEX44Q53QW1 395 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 TMEM215Q68D42 235 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 GSTA5Q7RTV2 222 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 AHI1Q8N157 1196 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 TEX26Q8N6G2 289 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 WFIKKN2Q8TEU8 576 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ZNF599Q96NL3 588 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 PNKPQ96T60 521 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 IL12RB2Q99665 862 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 FERMT1Q9BQL6 677 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 C2orf49Q9BVC5 232 aaPredicted RBP16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 C8orf33Q9H7E9 229 aaPredicted RBP16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 SLC2A4RGQ9NR83 387 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 VPS51Q9UID3 782 aa16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 NYNRINQ9P2P1 1898 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-228ENST00000583363 SPTBN4Q9H254 2564 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 FAM187AA6NFU0 413 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 EFCAB8A8MWE9 144 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 KCNK1O00180 336 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 TTI1O43156 1089 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 TIMM44O43615 452 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 KRT14P02533 472 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 SRFP11831 508 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 POLR2EP19388 210 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 SOX9P48436 509 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 GALK1P51570 392 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms