RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 NRDCO43847 1150 aa22.09■■□□□ 1.13
TSEN54-208ENST00000583173 SYNCRIPO60506 623 aaKnown RBP22.09■■□□□ 1.13
TSEN54-208ENST00000583173 SIN3BO75182 1162 aa22.09■■□□□ 1.13
TSEN54-208ENST00000583173 CTNNA1P35221 906 aaKnown RBP22.09■■□□□ 1.13
TSEN54-208ENST00000583173 NNMTP40261 264 aa22.09■■□□□ 1.13
TSEN54-208ENST00000583173 CLCN6P51797 869 aa22.09■■□□□ 1.13
TSEN54-208ENST00000583173 NCBP2-AS2Q69YL0 99 aa22.09■■□□□ 1.13
TSEN54-208ENST00000583173 TMCO3Q6UWJ1 677 aa22.09■■□□□ 1.13
TSEN54-208ENST00000583173 MFSD7Q6UXD7 560 aa22.09■■□□□ 1.13
TSEN54-208ENST00000583173 METTL3Q86U44 580 aaKnown RBP22.09■■□□□ 1.13
TSEN54-208ENST00000583173 RCOR2Q8IZ40 523 aa22.09■■□□□ 1.13
TSEN54-208ENST00000583173 OR2T3Q8NH03 318 aa22.09■■□□□ 1.13
TSEN54-208ENST00000583173 IRF2BPLQ9H1B7 796 aa22.09■■□□□ 1.13
TSEN54-208ENST00000583173 PRDM16Q9HAZ2 1276 aa22.09■■□□□ 1.13
TSEN54-208ENST00000583173 GUCA1BQ9UMX6 200 aa22.09■■□□□ 1.13
TSEN54-208ENST00000583173 CAPN6Q9Y6Q1 641 aa22.09■■□□□ 1.13
TSEN54-208ENST00000583173 CKAP5Q14008 2032 aa22.09■■□□□ 1.13
TSEN54-208ENST00000583173 EDDM13A0A1B0GTR0 161 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 LRRD1A4D1F6 860 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 ARHGAP42A6NI28 874 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 J3KR12 359 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 AXIN1O15169 862 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 HRO43593 1189 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 PRAMEF11O60813 436 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 ALDH1A2O94788 518 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 TNNT1P13805 278 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 NDUFV2P19404 249 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 CDKN2BP42772 138 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 SERPINH1P50454 418 aaKnown RBP22.08■■□□□ 1.13
TSEN54-208ENST00000583173 SLC10A2Q12908 348 aaPredicted RBP22.08■■□□□ 1.13
TSEN54-208ENST00000583173 STARD3Q14849 445 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 INO80DQ53TQ3 878 aaPredicted RBP22.08■■□□□ 1.13
TSEN54-208ENST00000583173 SLC9A4Q6AI14 798 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 ANO7Q6IWH7 933 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 ARHGAP36Q6ZRI8 547 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 TMPRSS6Q8IU80 811 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 REXO1L1PQ8IX06 675 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 PLPP6Q8IY26 295 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 ATP11CQ8NB49 1132 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 VOPP1Q96AW1 172 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 ISG20Q96AZ6 181 aaKnown RBP22.08■■□□□ 1.13
TSEN54-208ENST00000583173 RNF25Q96BH1 459 aaPredicted RBP22.08■■□□□ 1.13
TSEN54-208ENST00000583173 ERLEC1Q96DZ1 483 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 SLC6A17Q9H1V8 727 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 HPCAL4Q9UM19 191 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 HCN4Q9Y3Q4 1203 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 PCDHGA2Q9Y5H1 932 aa22.08■■□□□ 1.13
TSEN54-208ENST00000583173 ZSCAN5CA6NGD5 496 aaPredicted RBP22.07■■□□□ 1.12
TSEN54-208ENST00000583173 ZRANB2O95218 330 aaKnown RBP eCLIP22.07■■□□□ 1.12
TSEN54-208ENST00000583173 KRT1P04264 644 aa22.07■■□□□ 1.12
TSEN54-208ENST00000583173 HEATR6Q6AI08 1181 aaKnown RBP22.07■■□□□ 1.12
TSEN54-208ENST00000583173 SYCE1Q8N0S2 351 aa22.07■■□□□ 1.12
TSEN54-208ENST00000583173 OR2A12Q8NGT7 310 aa22.07■■□□□ 1.12
TSEN54-208ENST00000583173 EXD1Q8NHP7 514 aa22.07■■□□□ 1.12
TSEN54-208ENST00000583173 UBE2Q2Q8WVN8 375 aa22.07■■□□□ 1.12
TSEN54-208ENST00000583173 CEP44Q9C0F1 390 aa22.07■■□□□ 1.12
TSEN54-208ENST00000583173 RSPH9Q9H1X1 276 aaPredicted RBP22.07■■□□□ 1.12
TSEN54-208ENST00000583173 FBRSQ9HAH7 460 aa22.07■■□□□ 1.12
TSEN54-208ENST00000583173 AMFRQ9UKV5 643 aa22.07■■□□□ 1.12
TSEN54-208ENST00000583173 CCDC66A2RUB6 948 aa22.06■■□□□ 1.12
TSEN54-208ENST00000583173 DDX3YO15523 660 aaKnown RBP22.06■■□□□ 1.12
TSEN54-208ENST00000583173 PEX11BO96011 259 aa22.06■■□□□ 1.12
TSEN54-208ENST00000583173 PTMAP06454 111 aaKnown RBP22.06■■□□□ 1.12
TSEN54-208ENST00000583173 GEMIN4P57678 1058 aaKnown RBP22.06■■□□□ 1.12
TSEN54-208ENST00000583173 RPS14P62263 151 aaKnown RBP22.06■■□□□ 1.12
TSEN54-208ENST00000583173 CYTH1Q15438 398 aa22.06■■□□□ 1.12
TSEN54-208ENST00000583173 MAP7D1Q3KQU3 841 aa22.06■■□□□ 1.12
TSEN54-208ENST00000583173 LEKR1Q6ZMV7 388 aa22.06■■□□□ 1.12
TSEN54-208ENST00000583173 SPOCD1Q6ZMY3 1216 aa22.06■■□□□ 1.12
TSEN54-208ENST00000583173 PLD5Q8N7P1 536 aa22.06■■□□□ 1.12
TSEN54-208ENST00000583173 HMGB4Q8WW32 186 aa22.06■■□□□ 1.12
TSEN54-208ENST00000583173 CASKIN2Q8WXE0 1202 aa22.06■■□□□ 1.12
TSEN54-208ENST00000583173 ALG3Q92685 438 aa22.06■■□□□ 1.12
TSEN54-208ENST00000583173 HES6Q96HZ4 224 aa22.06■■□□□ 1.12
TSEN54-208ENST00000583173 ITM2CQ9NQX7 267 aa22.06■■□□□ 1.12
TSEN54-208ENST00000583173 MCF2LO15068 1137 aa22.05■■□□□ 1.12
TSEN54-208ENST00000583173 MAFKO60675 156 aa22.05■■□□□ 1.12
TSEN54-208ENST00000583173 CNR2P34972 360 aa22.05■■□□□ 1.12
TSEN54-208ENST00000583173 ADCY2Q08462 1091 aa22.05■■□□□ 1.12
TSEN54-208ENST00000583173 CCDC173Q0VFZ6 552 aa22.05■■□□□ 1.12
TSEN54-208ENST00000583173 GALNT2Q10471 571 aa22.05■■□□□ 1.12
TSEN54-208ENST00000583173 ACCSLQ4AC99 568 aa22.05■■□□□ 1.12
TSEN54-208ENST00000583173 ZFYVE27Q5T4F4 411 aa22.05■■□□□ 1.12
TSEN54-208ENST00000583173 LRRC49Q8IUZ0 686 aa22.05■■□□□ 1.12
TSEN54-208ENST00000583173 STK40Q8N2I9 435 aa22.05■■□□□ 1.12
TSEN54-208ENST00000583173 PCDH20Q8N6Y1 951 aaKnown RBP22.05■■□□□ 1.12
TSEN54-208ENST00000583173 LZTFL1Q9NQ48 299 aa22.05■■□□□ 1.12
TSEN54-208ENST00000583173 IPO11Q9UI26 975 aaKnown RBP22.05■■□□□ 1.12
TSEN54-208ENST00000583173 FCF1Q9Y324 198 aaKnown RBP22.05■■□□□ 1.12
TSEN54-208ENST00000583173 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.05■■□□□ 1.12
TSEN54-208ENST00000583173 DFFAO00273 331 aa22.04■■□□□ 1.12
TSEN54-208ENST00000583173 MFSD11O43934 449 aa22.04■■□□□ 1.12
TSEN54-208ENST00000583173 FTCDO95954 541 aa22.04■■□□□ 1.12
TSEN54-208ENST00000583173 SERPINB6P35237 376 aa22.04■■□□□ 1.12
TSEN54-208ENST00000583173 P2RY2P41231 377 aa22.04■■□□□ 1.12
TSEN54-208ENST00000583173 NBL1P41271 181 aa22.04■■□□□ 1.12
TSEN54-208ENST00000583173 GBE1Q04446 702 aa22.04■■□□□ 1.12
TSEN54-208ENST00000583173 IL10RBQ08334 325 aa22.04■■□□□ 1.12
TSEN54-208ENST00000583173 C22orf39Q6P5X5 142 aa22.04■■□□□ 1.12
TSEN54-208ENST00000583173 Q6ZVU0 165 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms