RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 CNTD1Q8N815 330 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 PCSK9Q8NBP7 692 aaKnown RBP13.93□□□□□ -0.18
SRSF1-205ENST00000582730 GPR152Q8TDT2 470 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 ACMSDQ8TDX5 336 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 SCG3Q8WXD2 468 aaKnown RBP13.93□□□□□ -0.18
SRSF1-205ENST00000582730 ZNF778Q96MU6 729 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 TRIM62Q9BVG3 475 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 PPP1R12CQ9BZL4 782 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 TRIM4Q9C037 500 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 ZCWPW1Q9H0M4 648 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 TRPV6Q9H1D0 765 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 NMUR1Q9HB89 426 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 SCOCQ9UIL1 159 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 DNAJC16Q9Y2G8 782 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 TDRD15B5MCY1 1934 aaKnown RBP13.92□□□□□ -0.18
SRSF1-205ENST00000582730 BIRC5O15392 142 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 CCDC22O60826 627 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 DDHD2O94830 711 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 SKIP12755 728 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 NMBRP28336 390 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 SLC5A9Q2M3M2 681 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 GRTP1Q5TC63 336 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 NAPEPLDQ6IQ20 393 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 FSTL4Q6MZW2 842 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 FAM193BQ96PV7 902 aaPredicted RBP13.92□□□□□ -0.18
SRSF1-205ENST00000582730 VAT1Q99536 393 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 RBBP8Q99708 897 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 ATXN3LQ9H3M9 355 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 NDFIP2Q9NV92 336 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 THAP1Q9NVV9 213 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 KCNK4Q9NYG8 393 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 HTTP42858 3142 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 ERI2A8K979 691 aaKnown RBP13.92□□□□□ -0.18
SRSF1-205ENST00000582730 PMPCBO75439 489 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 KRT36O76013 467 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 USP1O94782 785 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 CDH17Q12864 832 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 MPP3Q13368 585 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 KCTD11Q693B1 232 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 RAPH1Q70E73 1250 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 UROC1Q96N76 676 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 PKMYT1Q99640 499 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 EBF4Q9BQW3 602 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 RNF186Q9NXI6 227 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 LNPEPQ9UIQ6 1025 aa13.92□□□□□ -0.18
SRSF1-205ENST00000582730 ZCWPW2A0A1B0GU75 182 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 ARHGEF37A1IGU5 675 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 GRK4P32298 578 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 SLC1A6P48664 564 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 SERPINB8P50452 374 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 ZNF135P52742 658 aaPredicted RBP13.91□□□□□ -0.18
SRSF1-205ENST00000582730 PGGT1BP53609 377 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 RNF180Q86T96 592 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 TMEM135Q86UB9 458 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 WDR75Q8IWA0 830 aaKnown RBP13.91□□□□□ -0.18
SRSF1-205ENST00000582730 KLHDC9Q8NEP7 349 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 SLC39A8Q9C0K1 460 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 IL22Q9GZX6 179 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 OSBPL2Q9H1P3 480 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 CATSPERBQ9H7T0 1116 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 A0A096LPK6 155 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 TMEM88BA6NKF7 163 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 IRF9Q00978 393 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 KDSRQ06136 332 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 ITGA9Q13797 1035 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 PCLAFQ15004 111 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 ACSBG2Q5FVE4 666 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 MBLAC2Q68D91 279 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 TFAP2DQ7Z6R9 452 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 SCD5Q86SK9 330 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 PPP4R1Q8TF05 950 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 FICDQ9BVA6 458 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 SLC39A10Q9ULF5 831 aa13.91□□□□□ -0.18
SRSF1-205ENST00000582730 A0A1B0GVG6 124 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 ZNF189O75820 626 aaPredicted RBP13.9□□□□□ -0.18
SRSF1-205ENST00000582730 FGF3P11487 239 aaPredicted RBP13.9□□□□□ -0.18
SRSF1-205ENST00000582730 NPY2RP49146 381 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 ACLYP53396 1101 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 PCSK7Q16549 785 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 TEDDM1Q5T9Z0 273 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 PLD6Q8N2A8 252 aaKnown RBP13.9□□□□□ -0.18
SRSF1-205ENST00000582730 URGCPQ8TCY9 931 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 AGR3Q8TD06 166 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 B3GALT6Q96L58 329 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 GLT1D1Q96MS3 346 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 BTBD10Q9BSF8 475 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 FSD1LQ9BXM9 530 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 DNAJB4Q9UDY4 337 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 TLL2Q9Y6L7 1015 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 DNAJC6O75061 913 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 SNNO75324 88 aaPredicted RBP13.9□□□□□ -0.18
SRSF1-205ENST00000582730 TADA2AO75478 443 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 IL1BP01584 269 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 CKBP12277 381 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 AVPR1AP37288 418 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 LIMK2P53671 638 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 SEPT6Q14141 434 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 KPNB1Q14974 876 aaKnown RBP13.9□□□□□ -0.18
SRSF1-205ENST00000582730 SPDYAQ5MJ70 313 aa13.9□□□□□ -0.18
SRSF1-205ENST00000582730 BRMS1LQ5PSV4 323 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms