RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 SLC6A11P48066 632 aa13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 CCR3P51677 355 aa13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 NRLP54845 237 aa13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 TPI1P60174 286 aa13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 SEMA3BQ13214 749 aa13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 CCINQ13939 588 aa13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 DMC1Q14565 340 aa13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 DPYSL2Q16555 572 aa13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 C6orf118Q5T5N4 469 aa13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 HEATR6Q6AI08 1181 aaKnown RBP13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 FSTL4Q6MZW2 842 aa13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 CYP4V2Q6ZWL3 525 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 SETD3Q86TU7 594 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 CIR1Q86X95 450 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 AHI1Q8N157 1196 aa13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 PHTF2Q8N3S3 785 aa13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 FAM160A2Q8N612 972 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 KCNV2Q8TDN2 545 aa13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 UCMAQ8WVF2 138 aa13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 HSPH1Q92598 858 aa13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 ALG3Q92685 438 aa13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 KRT35Q92764 455 aa13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 MYEOVQ96EZ4 313 aa13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 FRMD8P1Q9BZ68 369 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 ABCB8Q9NUT2 735 aa13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 KIAA1522Q9P206 1035 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 RCOR3Q9P2K3 495 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 GGA2Q9UJY4 613 aa13.82□□□□□ -0.2
CSNK1D-220ENST00000581737 A0A0A0MRY4 1105 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 EEF2KO00418 725 aaKnown RBP13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 TM4SF5O14894 197 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 DAPK3O43293 454 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 TIMM44O43615 452 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 CREB3O43889 395 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 LRP3O75074 770 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 TJP3O95049 919 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 GAS8O95995 478 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 RHOCP08134 193 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 RARAP10276 462 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 HOXB3P14651 431 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 IL1R2P27930 398 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 PTPN7P35236 360 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 GJC1P36383 396 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 ETFBP38117 255 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 HCAR3P49019 387 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 MAPKAPK2P49137 400 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 DR1Q01658 176 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 ZNF211Q13398 564 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 KRT81Q14533 505 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 SF3A2Q15428 464 aaKnown RBP13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 SMTNL2Q2TAL5 461 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 PPP6R3Q5H9R7 873 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 DCAF12L1Q5VU92 463 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 DAB2IPQ5VWQ8 1189 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 NAIF1Q69YI7 327 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 ZNF783Q6ZMS7 281 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 TRMT11Q7Z4G4 463 aaKnown RBP13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 MAP7D3Q8IWC1 876 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 PYROXD2Q8N2H3 581 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 C12orf50Q8NA57 414 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 CCHCR1Q8TD31 782 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 MAGOHBQ96A72 148 aaKnown RBP13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 P2RY11Q96G91 374 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 KCTD15Q96SI1 283 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 AP1M1Q9BXS5 423 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 VIPAS39Q9H9C1 493 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 TMEM248Q9NWD8 314 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 GPATCH2LQ9NWQ4 482 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 SMARCAL1Q9NZC9 954 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 TBC1D30Q9Y2I9 924 aa13.81□□□□□ -0.2
CSNK1D-220ENST00000581737 FAM72CH0Y354 149 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 NPC1O15118 1278 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 RAD51CO43502 376 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 ATG13O75143 517 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 EGFP01133 1207 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 ATP5BP06576 529 aaKnown RBP13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 TCF4P15884 667 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 HLA-FP30511 346 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 OR1E1P30953 314 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 IRAK1P51617 712 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 TAS2R40P59535 323 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 GUCY2DQ02846 1103 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 LMAN2Q12907 356 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 PDK2Q15119 407 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 CYP1B1Q16678 543 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 CA9Q16790 459 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 HSF5Q4G112 596 aaPredicted RBP13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 ALFQ53S48 1182 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 HSP90B2PQ58FF3 399 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 KCNT1Q5JUK3 1230 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 FAM72AQ5TYM5 149 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 FAM72DQ6L9T8 149 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 CXorf57Q6NSI4 855 aaKnown RBP13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 CCNI2Q6ZMN8 369 aaPredicted RBP13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 RFX8Q6ZV50 586 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 TFAP2DQ7Z6R9 452 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 KIAA0907Q7Z7F0 614 aaPredicted RBP13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 FAM72BQ86X60 149 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 RTL3Q8N8U3 475 aaKnown RBP13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 TTC13Q8NBP0 860 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms