RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 A0A1W2PP55 124 aa20.56■□□□□ 0.88
SS18-218ENST00000581021 PLK4O00444 970 aa20.56■□□□□ 0.88
SS18-218ENST00000581021 AKR1B10O60218 316 aa20.56■□□□□ 0.88
SS18-218ENST00000581021 NDUFS2O75306 463 aa20.56■□□□□ 0.88
SS18-218ENST00000581021 GOT1P17174 413 aa20.56■□□□□ 0.88
SS18-218ENST00000581021 OXTRP30559 389 aa20.56■□□□□ 0.88
SS18-218ENST00000581021 TPI1P60174 286 aa20.56■□□□□ 0.88
SS18-218ENST00000581021 IL31Q6EBC2 164 aa20.56■□□□□ 0.88
SS18-218ENST00000581021 LEKR1Q6ZMV7 388 aa20.56■□□□□ 0.88
SS18-218ENST00000581021 CHST14Q8NCH0 376 aa20.56■□□□□ 0.88
SS18-218ENST00000581021 OR2A12Q8NGT7 310 aa20.56■□□□□ 0.88
SS18-218ENST00000581021 ZNF564Q8TBZ8 553 aaPredicted RBP20.56■□□□□ 0.88
SS18-218ENST00000581021 VOPP1Q96AW1 172 aa20.56■□□□□ 0.88
SS18-218ENST00000581021 HMCESQ96FZ2 354 aa20.56■□□□□ 0.88
SS18-218ENST00000581021 MRFAP1L1Q96HT8 127 aa20.56■□□□□ 0.88
SS18-218ENST00000581021 FCF1Q9Y324 198 aaKnown RBP20.56■□□□□ 0.88
SS18-218ENST00000581021 C10orf142B7Z368 130 aa20.55■□□□□ 0.88
SS18-218ENST00000581021 BNIP3LO60238 219 aa20.55■□□□□ 0.88
SS18-218ENST00000581021 DESP17661 470 aa20.55■□□□□ 0.88
SS18-218ENST00000581021 MAOBP27338 520 aa20.55■□□□□ 0.88
SS18-218ENST00000581021 SLC8A1P32418 973 aa20.55■□□□□ 0.88
SS18-218ENST00000581021 DRD3P35462 400 aa20.55■□□□□ 0.88
SS18-218ENST00000581021 CLCN6P51797 869 aa20.55■□□□□ 0.88
SS18-218ENST00000581021 LMNB2Q03252 620 aa20.55■□□□□ 0.88
SS18-218ENST00000581021 PIGHQ14442 188 aaPredicted RBP20.55■□□□□ 0.88
SS18-218ENST00000581021 POM121L1PQ3SYA9 428 aa20.55■□□□□ 0.88
SS18-218ENST00000581021 TTC31Q49AM3 519 aaPredicted RBP20.55■□□□□ 0.88
SS18-218ENST00000581021 RFX8Q6ZV50 586 aa20.55■□□□□ 0.88
SS18-218ENST00000581021 SYT12Q8IV01 421 aa20.55■□□□□ 0.88
SS18-218ENST00000581021 UMODL1-AS1Q8N2C9 162 aa20.55■□□□□ 0.88
SS18-218ENST00000581021 NPWQ8N729 165 aa20.55■□□□□ 0.88
SS18-218ENST00000581021 NETO2Q8NC67 525 aa20.55■□□□□ 0.88
SS18-218ENST00000581021 MAGEH1Q9H213 219 aa20.55■□□□□ 0.88
SS18-218ENST00000581021 DEF6Q9H4E7 631 aa20.55■□□□□ 0.88
SS18-218ENST00000581021 OSGEPQ9NPF4 335 aa20.55■□□□□ 0.88
SS18-218ENST00000581021 FSCN3Q9NQT6 498 aa20.55■□□□□ 0.88
SS18-218ENST00000581021 FBXL12Q9NXK8 326 aa20.55■□□□□ 0.88
SS18-218ENST00000581021 IP6K2Q9UHH9 426 aa20.55■□□□□ 0.88
SS18-218ENST00000581021 PPM1HQ9ULR3 514 aa20.55■□□□□ 0.88
SS18-218ENST00000581021 LNP1A1A4G5 178 aa20.54■□□□□ 0.88
SS18-218ENST00000581021 RASA4BC9J798 803 aa20.54■□□□□ 0.88
SS18-218ENST00000581021 EEF2KO00418 725 aaKnown RBP20.54■□□□□ 0.88
SS18-218ENST00000581021 MCF2LO15068 1137 aa20.54■□□□□ 0.88
SS18-218ENST00000581021 FGF10O15520 208 aaPredicted RBP20.54■□□□□ 0.88
SS18-218ENST00000581021 RASA4O43374 803 aa20.54■□□□□ 0.88
SS18-218ENST00000581021 RNASEH1O60930 286 aaKnown RBP20.54■□□□□ 0.88
SS18-218ENST00000581021 IL1BP01584 269 aa20.54■□□□□ 0.88
SS18-218ENST00000581021 H2AFZP0C0S5 128 aa20.54■□□□□ 0.88
SS18-218ENST00000581021 TMEM253P0C7T8 217 aa20.54■□□□□ 0.88
SS18-218ENST00000581021 RARAP10276 462 aa20.54■□□□□ 0.88
SS18-218ENST00000581021 DPYSQ14117 519 aa20.54■□□□□ 0.88
SS18-218ENST00000581021 ACAP1Q15027 740 aa20.54■□□□□ 0.88
SS18-218ENST00000581021 POLD3Q15054 466 aaPredicted RBP20.54■□□□□ 0.88
SS18-218ENST00000581021 PPP6R3Q5H9R7 873 aaPredicted RBP20.54■□□□□ 0.88
SS18-218ENST00000581021 RETSATQ6NUM9 610 aa20.54■□□□□ 0.88
SS18-218ENST00000581021 USP30Q70CQ3 517 aa20.54■□□□□ 0.88
SS18-218ENST00000581021 H2AFVQ71UI9 128 aa20.54■□□□□ 0.88
SS18-218ENST00000581021 PSTKQ8IV42 348 aaKnown RBP20.54■□□□□ 0.88
SS18-218ENST00000581021 OR8D1Q8WZ84 308 aa20.54■□□□□ 0.88
SS18-218ENST00000581021 NEUROG2Q9H2A3 272 aa20.54■□□□□ 0.88
SS18-218ENST00000581021 LRRC19Q9H756 370 aa20.54■□□□□ 0.88
SS18-218ENST00000581021 ZWILCHQ9H900 591 aa20.54■□□□□ 0.88
SS18-218ENST00000581021 CWC15Q9P013 229 aaKnown RBP20.54■□□□□ 0.88
SS18-218ENST00000581021 CTTNBP2NLQ9P2B4 639 aa20.54■□□□□ 0.88
SS18-218ENST00000581021 MFHAS1Q9Y4C4 1052 aa20.54■□□□□ 0.88
SS18-218ENST00000581021 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.53■□□□□ 0.88
SS18-218ENST00000581021 METTL12A8MUP2 240 aa20.53■□□□□ 0.88
SS18-218ENST00000581021 RNASEH2AO75792 299 aaKnown RBP20.53■□□□□ 0.88
SS18-218ENST00000581021 SEMA4FO95754 770 aa20.53■□□□□ 0.88
SS18-218ENST00000581021 HTR7P34969 479 aa20.53■□□□□ 0.88
SS18-218ENST00000581021 IRX4P78413 519 aa20.53■□□□□ 0.88
SS18-218ENST00000581021 DPYSL2Q16555 572 aa20.53■□□□□ 0.88
SS18-218ENST00000581021 RSPO4Q2I0M5 234 aaPredicted RBP20.53■□□□□ 0.88
SS18-218ENST00000581021 TSR1Q2NL82 804 aaKnown RBP20.53■□□□□ 0.88
SS18-218ENST00000581021 DCAF12L1Q5VU92 463 aa20.53■□□□□ 0.88
SS18-218ENST00000581021 DPY19L3Q6ZPD9 716 aa20.53■□□□□ 0.88
SS18-218ENST00000581021 TP53INP2Q8IXH6 220 aa20.53■□□□□ 0.88
SS18-218ENST00000581021 CADM4Q8NFZ8 388 aa20.53■□□□□ 0.88
SS18-218ENST00000581021 CTNNBL1Q8WYA6 563 aaPredicted RBP20.53■□□□□ 0.88
SS18-218ENST00000581021 DNASE2BQ8WZ79 361 aa20.53■□□□□ 0.88
SS18-218ENST00000581021 HSPH1Q92598 858 aa20.53■□□□□ 0.88
SS18-218ENST00000581021 FAM131CQ96AQ9 280 aa20.53■□□□□ 0.88
SS18-218ENST00000581021 CELF6Q96J87 481 aaKnown RBP20.53■□□□□ 0.88
SS18-218ENST00000581021 CCDC42Q96M95 316 aa20.53■□□□□ 0.88
SS18-218ENST00000581021 BTBD1Q9H0C5 482 aa20.53■□□□□ 0.88
SS18-218ENST00000581021 CATSPERBQ9H7T0 1116 aa20.53■□□□□ 0.88
SS18-218ENST00000581021 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.53■□□□□ 0.88
SS18-218ENST00000581021 SCML1Q9UN30 329 aa20.53■□□□□ 0.88
SS18-218ENST00000581021 PCDH15Q96QU1 1955 aa20.52■□□□□ 0.88
SS18-218ENST00000581021 EIF3CLB5ME19 914 aaKnown RBP20.52■□□□□ 0.88
SS18-218ENST00000581021 MYO1FO00160 1098 aa20.52■□□□□ 0.88
SS18-218ENST00000581021 ALOX15BO15296 676 aa20.52■□□□□ 0.88
SS18-218ENST00000581021 KDELR3O43731 214 aa20.52■□□□□ 0.88
SS18-218ENST00000581021 PROSCO94903 275 aa20.52■□□□□ 0.88
SS18-218ENST00000581021 ADH1BP00325 375 aa20.52■□□□□ 0.88
SS18-218ENST00000581021 ERCC2P18074 760 aa20.52■□□□□ 0.88
SS18-218ENST00000581021 C5AR1P21730 350 aa20.52■□□□□ 0.88
SS18-218ENST00000581021 ETFBP38117 255 aa20.52■□□□□ 0.88
SS18-218ENST00000581021 TAS2R40P59535 323 aa20.52■□□□□ 0.88
SS18-218ENST00000581021 TRIM61Q5EBN2 209 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms