RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 CEP44Q9C0F1 390 aa20.6■□□□□ 0.89
SMG8-204ENST00000580498 CATSPERBQ9H7T0 1116 aa20.6■□□□□ 0.89
SMG8-204ENST00000580498 AASDHPPTQ9NRN7 309 aa20.6■□□□□ 0.89
SMG8-204ENST00000580498 CXorf51AA0A1B0GTR3 108 aa20.59■□□□□ 0.89
SMG8-204ENST00000580498 A0A1B0GVT2 93 aa20.59■□□□□ 0.89
SMG8-204ENST00000580498 SNAP91O60641 907 aa20.59■□□□□ 0.89
SMG8-204ENST00000580498 MAGEC1O60732 1142 aa20.59■□□□□ 0.89
SMG8-204ENST00000580498 RAMP2O60895 175 aa20.59■□□□□ 0.89
SMG8-204ENST00000580498 VAV1P15498 845 aa20.59■□□□□ 0.89
SMG8-204ENST00000580498 CSNK1EP49674 416 aaKnown RBP20.59■□□□□ 0.89
SMG8-204ENST00000580498 IRF2BP2Q7Z5L9 587 aa20.59■□□□□ 0.89
SMG8-204ENST00000580498 AADATQ8N5Z0 425 aa20.59■□□□□ 0.89
SMG8-204ENST00000580498 PCDH20Q8N6Y1 951 aaKnown RBP20.59■□□□□ 0.89
SMG8-204ENST00000580498 OR52K2Q8NGK3 314 aa20.59■□□□□ 0.89
SMG8-204ENST00000580498 PSMB7Q99436 277 aa20.59■□□□□ 0.89
SMG8-204ENST00000580498 NCAPGQ9BPX3 1015 aa20.59■□□□□ 0.89
SMG8-204ENST00000580498 MAGEH1Q9H213 219 aa20.59■□□□□ 0.89
SMG8-204ENST00000580498 TMPRSS4Q9NRS4 437 aa20.59■□□□□ 0.89
SMG8-204ENST00000580498 SERGEFQ9UGK8 458 aa20.59■□□□□ 0.89
SMG8-204ENST00000580498 ANKRD6Q9Y2G4 727 aa20.59■□□□□ 0.89
SMG8-204ENST00000580498 BZW2Q9Y6E2 419 aaKnown RBP20.59■□□□□ 0.89
SMG8-204ENST00000580498 NCOR2Q9Y618 2525 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 A0A0D9SEW6 157 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 ZSCAN5CA6NGD5 496 aaPredicted RBP20.58■□□□□ 0.89
SMG8-204ENST00000580498 I6L893 689 aaPredicted RBP20.58■□□□□ 0.89
SMG8-204ENST00000580498 KPNA3O00505 521 aaPredicted RBP20.58■□□□□ 0.89
SMG8-204ENST00000580498 RNF8O76064 485 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 TRIM16O95361 564 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 GZMAP12544 262 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 RRM1P23921 792 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 PMLP29590 882 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 CHRNA3P32297 505 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 DNA2P51530 1060 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 HDAC4P56524 1084 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 UBASH3AP57075 661 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 SCAPQ12770 1279 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 POLD3Q15054 466 aaPredicted RBP20.58■□□□□ 0.89
SMG8-204ENST00000580498 HLA-BQ31612 363 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 C22orf39Q6P5X5 142 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 NAXDQ8IW45 347 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 TMIEQ8NEW7 156 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 OR7D4Q8NG98 312 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 SETD7Q8WTS6 366 aaKnown RBP20.58■□□□□ 0.89
SMG8-204ENST00000580498 BAP1Q92560 729 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 HAUS4Q9H6D7 363 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 PREBQ9HCU5 417 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 TM7SF3Q9NS93 570 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 TMEM248Q9NWD8 314 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 AIPL1Q9NZN9 384 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 IL36AQ9UHA7 158 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 PPM1HQ9ULR3 514 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 SCINQ9Y6U3 715 aa20.58■□□□□ 0.89
SMG8-204ENST00000580498 TMCO5BA8MYB1 307 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 GIPC1O14908 333 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 FLRT2O43155 660 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 CCP110O43303 1012 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 GJB6O95452 261 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 MYBL1P10243 752 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 L1CAMP32004 1257 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 HTR7P34969 479 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 SERPINH1P50454 418 aaKnown RBP20.57■□□□□ 0.88
SMG8-204ENST00000580498 CCT8P50990 548 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 SIM1P81133 766 aaPredicted RBP20.57■□□□□ 0.88
SMG8-204ENST00000580498 FOXC1Q12948 553 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 IQCB1Q15051 598 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 SETMARQ53H47 684 aaPredicted RBP20.57■□□□□ 0.88
SMG8-204ENST00000580498 TDRD12Q587J7 1177 aaKnown RBP20.57■□□□□ 0.88
SMG8-204ENST00000580498 FIGNQ5HY92 759 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 LINGO4Q6UY18 593 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 PIP4P1Q86T03 277 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 OR2I1PQ8NGU4 316 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 C1orf216Q8TAB5 229 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 SERAC1Q96JX3 654 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 FUCA2Q9BTY2 467 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 CBX8Q9HC52 389 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 MRPL47Q9HD33 250 aaKnown RBP20.57■□□□□ 0.88
SMG8-204ENST00000580498 DNAI1Q9UI46 699 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 DMTF1Q9Y222 760 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 PCDHGB2Q9Y5G2 931 aa20.57■□□□□ 0.88
SMG8-204ENST00000580498 DNAH14Q0VDD8 3507 aa20.56■□□□□ 0.88
SMG8-204ENST00000580498 EIF3CLB5ME19 914 aaKnown RBP20.56■□□□□ 0.88
SMG8-204ENST00000580498 VILLO15195 856 aa20.56■□□□□ 0.88
SMG8-204ENST00000580498 YKT6O15498 198 aa20.56■□□□□ 0.88
SMG8-204ENST00000580498 FGF10O15520 208 aaPredicted RBP20.56■□□□□ 0.88
SMG8-204ENST00000580498 PLRG1O43660 514 aaKnown RBP20.56■□□□□ 0.88
SMG8-204ENST00000580498 LRIG2O94898 1065 aa20.56■□□□□ 0.88
SMG8-204ENST00000580498 IGHV4-34P06331 123 aa20.56■□□□□ 0.88
SMG8-204ENST00000580498 PSMA2P25787 234 aa20.56■□□□□ 0.88
SMG8-204ENST00000580498 CD38P28907 300 aa20.56■□□□□ 0.88
SMG8-204ENST00000580498 EPHB2P29323 1055 aa20.56■□□□□ 0.88
SMG8-204ENST00000580498 PRKCIP41743 596 aa20.56■□□□□ 0.88
SMG8-204ENST00000580498 SHC2P98077 582 aa20.56■□□□□ 0.88
SMG8-204ENST00000580498 FANCCQ00597 558 aa20.56■□□□□ 0.88
SMG8-204ENST00000580498 NR1I3Q14994 352 aa20.56■□□□□ 0.88
SMG8-204ENST00000580498 ZNF423Q2M1K9 1284 aa20.56■□□□□ 0.88
SMG8-204ENST00000580498 TMC6Q7Z403 805 aa20.56■□□□□ 0.88
SMG8-204ENST00000580498 RYBPQ8N488 228 aaPredicted RBP20.56■□□□□ 0.88
SMG8-204ENST00000580498 CCDC185Q8N715 623 aa20.56■□□□□ 0.88
SMG8-204ENST00000580498 EIF3CQ99613 913 aaKnown RBP20.56■□□□□ 0.88
SMG8-204ENST00000580498 CREB3O43889 395 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms