RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 ANKRD20A12PQ8NF67 263 aa13.73□□□□□ -0.21
TRAF4-214ENST00000580073 ZNF606Q8WXB4 792 aa13.73□□□□□ -0.21
TRAF4-214ENST00000580073 C2orf49Q9BVC5 232 aaPredicted RBP13.73□□□□□ -0.21
TRAF4-214ENST00000580073 IFNKQ9P0W0 207 aa13.73□□□□□ -0.21
TRAF4-214ENST00000580073 XPO7Q9UIA9 1087 aaKnown RBP13.73□□□□□ -0.21
TRAF4-214ENST00000580073 SYNJ2BP-COX16A0A087WUM0 186 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 GOLGA6L19H0YKK7 550 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 TK2O00142 265 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 MCF2LO15068 1137 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 SERPINC1P01008 464 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 ALPPL2P10696 532 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 ACP1P24666 158 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 ACTN2P35609 894 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 JAM2P57087 298 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 POLR2FP61218 127 aaKnown RBP13.72□□□□□ -0.21
TRAF4-214ENST00000580073 DAB2P98082 770 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 E2F1Q01094 437 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 DNAJC3Q13217 504 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 RTP5Q14D33 572 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 NEK5Q6P3R8 708 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 DENND1BQ6P3S1 775 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 FBXL19Q6PCT2 694 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 ZSCAN30Q86W11 494 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 ZDHHC17Q8IUH5 632 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 FAM71AQ8IYT1 594 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 SNIP1Q8TAD8 396 aaKnown RBP13.72□□□□□ -0.21
TRAF4-214ENST00000580073 PIP4K2CQ8TBX8 421 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 FRS2Q8WU20 508 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 RFFLQ8WZ73 363 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 TSC1Q92574 1164 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 MYEOVQ96EZ4 313 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 KLHDC7BQ96G42 594 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 PPP1R16AQ96I34 528 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 SLC2A13Q96QE2 648 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 PRMT1Q99873 361 aaKnown RBP13.72□□□□□ -0.21
TRAF4-214ENST00000580073 MUC3BQ9H195 1237 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 SYNCQ9H7C4 482 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 EBF2Q9HAK2 575 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 NLRC4Q9NPP4 1024 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 COX16Q9P0S2 106 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 STAP1Q9ULZ2 295 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 CLCA2Q9UQC9 943 aa13.72□□□□□ -0.21
TRAF4-214ENST00000580073 CHD5Q8TDI0 1954 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 LAMA5O15230 3695 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 RTN2O75298 545 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 DAB1O75553 588 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 PRNPP04156 253 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 TPM2P07951 284 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 AKT2P31751 481 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 USP8P40818 1118 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 EIF2S3P41091 472 aaKnown RBP13.71□□□□□ -0.21
TRAF4-214ENST00000580073 RECQLP46063 649 aaPredicted RBP13.71□□□□□ -0.21
TRAF4-214ENST00000580073 CLCN6P51797 869 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 CDH4P55283 916 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 UBASH3AP57075 661 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 PTK2Q05397 1052 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 RAPGEF1Q13905 1077 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 SHBQ15464 509 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 BRMS1LQ5PSV4 323 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 AGBL4Q5VU57 503 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 CXorf57Q6NSI4 855 aaKnown RBP13.71□□□□□ -0.21
TRAF4-214ENST00000580073 DEFB106AQ8N104 65 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 SH2D3CQ8N5H7 860 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 C1orf131Q8NDD1 294 aaKnown RBP13.71□□□□□ -0.21
TRAF4-214ENST00000580073 PPP1R13BQ96KQ4 1090 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 STK33Q9BYT3 514 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 XPO4Q9C0E2 1151 aaKnown RBP13.71□□□□□ -0.21
TRAF4-214ENST00000580073 VANGL2Q9ULK5 521 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 PCDHGC3Q9UN70 934 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 HS3ST2Q9Y278 367 aa13.71□□□□□ -0.21
TRAF4-214ENST00000580073 F8VZ95 297 aa13.7□□□□□ -0.22
TRAF4-214ENST00000580073 RHOCP08134 193 aa13.7□□□□□ -0.22
TRAF4-214ENST00000580073 GLDCP23378 1020 aa13.7□□□□□ -0.22
TRAF4-214ENST00000580073 MAT2AP31153 395 aaKnown RBP13.7□□□□□ -0.22
TRAF4-214ENST00000580073 SEMG2Q02383 582 aa13.7□□□□□ -0.22
TRAF4-214ENST00000580073 CENPCQ03188 943 aa13.7□□□□□ -0.22
TRAF4-214ENST00000580073 C19orf57Q0VDD7 668 aa13.7□□□□□ -0.22
TRAF4-214ENST00000580073 CNTN1Q12860 1018 aa13.7□□□□□ -0.22
TRAF4-214ENST00000580073 TARDBPQ13148 414 aaKnown RBP eCLIP13.7□□□□□ -0.22
TRAF4-214ENST00000580073 ZNF211Q13398 564 aaPredicted RBP13.7□□□□□ -0.22
TRAF4-214ENST00000580073 EIF4EBP2Q13542 120 aaPredicted RBP13.7□□□□□ -0.22
TRAF4-214ENST00000580073 AUHQ13825 339 aaKnown RBP13.7□□□□□ -0.22
TRAF4-214ENST00000580073 DLG2Q15700 870 aa13.7□□□□□ -0.22
TRAF4-214ENST00000580073 PRAMEF14Q5SWL7 426 aa13.7□□□□□ -0.22
TRAF4-214ENST00000580073 FBXL22Q6P050 247 aa13.7□□□□□ -0.22
TRAF4-214ENST00000580073 LRRC31Q6UY01 552 aa13.7□□□□□ -0.22
TRAF4-214ENST00000580073 Q6ZVU0 165 aa13.7□□□□□ -0.22
TRAF4-214ENST00000580073 SLC47A2Q86VL8 602 aa13.7□□□□□ -0.22
TRAF4-214ENST00000580073 CIR1Q86X95 450 aaPredicted RBP13.7□□□□□ -0.22
TRAF4-214ENST00000580073 MARCH9Q86YJ5 346 aa13.7□□□□□ -0.22
TRAF4-214ENST00000580073 MSANTD4Q8NCY6 345 aa13.7□□□□□ -0.22
TRAF4-214ENST00000580073 LSM14AQ8ND56 463 aaKnown RBP13.7□□□□□ -0.22
TRAF4-214ENST00000580073 IFT43Q96FT9 208 aa13.7□□□□□ -0.22
TRAF4-214ENST00000580073 FEM1AQ9BSK4 669 aa13.7□□□□□ -0.22
TRAF4-214ENST00000580073 TTYH3Q9C0H2 523 aa13.7□□□□□ -0.22
TRAF4-214ENST00000580073 USP29Q9HBJ7 922 aa13.7□□□□□ -0.22
TRAF4-214ENST00000580073 PPM1HQ9ULR3 514 aa13.7□□□□□ -0.22
TRAF4-214ENST00000580073 LOC400499M0QZD8 3231 aa13.7□□□□□ -0.22
TRAF4-214ENST00000580073 IGSF10Q6WRI0 2623 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 A0A1W2PQC6 194 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms