RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 GLOD4Q9HC38 313 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 MED4Q9NPJ6 270 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 HAUS2Q9NVX0 235 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 TBC1D14Q9P2M4 693 aa18.92■□□□□ 0.62
PRKCA-203ENST00000578063 AGPSO00116 658 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 PSMD3O43242 534 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 OPA1O60313 960 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 SUN1O94901 812 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 ACSL3O95573 720 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 GLP2RO95838 553 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 HLA-DQB2P05538 268 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 ABHD2P08910 425 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 MAGEA3P43357 314 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 OXCT1P55809 520 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 KYNUQ16719 465 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 BBS9Q3SYG4 887 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 MSS51Q4VC12 460 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 RNF43Q68DV7 783 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 ZNF534Q76KX8 674 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 GPR149Q86SP6 731 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 CAND1Q86VP6 1230 aaKnown RBP18.91■□□□□ 0.62
PRKCA-203ENST00000578063 ARID3BQ8IVW6 561 aaPredicted RBP18.91■□□□□ 0.62
PRKCA-203ENST00000578063 OR7D4Q8NG98 312 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 LRRC39Q96DD0 335 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 ZNF419Q96HQ0 510 aaPredicted RBP18.91■□□□□ 0.62
PRKCA-203ENST00000578063 ZSWIM3Q96MP5 696 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 GORASP1Q9BQQ3 440 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 ACE2Q9BYF1 805 aaPredicted RBP18.91■□□□□ 0.62
PRKCA-203ENST00000578063 MUC3BQ9H195 1237 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 ATP13A1Q9HD20 1204 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 AAR2Q9Y312 384 aaKnown RBP18.91■□□□□ 0.62
PRKCA-203ENST00000578063 NFS1Q9Y697 457 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 TNRC18O15417 2968 aaPredicted RBP18.91■□□□□ 0.62
PRKCA-203ENST00000578063 KDELR3O43731 214 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 ANXA9O76027 345 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 FSHRP23945 695 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 MMP13P45452 471 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 RGS19P49795 217 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 IFFO1Q0D2I5 559 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 LBRQ14739 615 aaKnown RBP18.91■□□□□ 0.62
PRKCA-203ENST00000578063 FASTKD3Q14CZ7 662 aaKnown RBP18.91■□□□□ 0.62
PRKCA-203ENST00000578063 CCDC38Q502W7 563 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 RNF219Q5W0B1 726 aaPredicted RBP18.91■□□□□ 0.62
PRKCA-203ENST00000578063 ANKRD54Q6NXT1 300 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 MFN1Q8IWA4 741 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 CELF5Q8N6W0 485 aaKnown RBP18.91■□□□□ 0.62
PRKCA-203ENST00000578063 GOLGA6L1Q8N7Z2 621 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 RIN3Q8TB24 985 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 PYROXD1Q8WU10 500 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 OTUB2Q96DC9 234 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 SPON2Q9BUD6 331 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 LRRC40Q9H9A6 602 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 LMCD1Q9NZU5 365 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 TTLL3Q9Y4R7 772 aa18.91■□□□□ 0.62
PRKCA-203ENST00000578063 TSHRP16473 764 aa18.9■□□□□ 0.62
PRKCA-203ENST00000578063 HOXB8P17481 243 aaPredicted RBP18.9■□□□□ 0.62
PRKCA-203ENST00000578063 SLC10A7Q0GE19 358 aa18.9■□□□□ 0.62
PRKCA-203ENST00000578063 RFTN1Q14699 578 aaPredicted RBP18.9■□□□□ 0.62
PRKCA-203ENST00000578063 KCTD11Q693B1 232 aa18.9■□□□□ 0.62
PRKCA-203ENST00000578063 LRRC8BQ6P9F7 803 aa18.9■□□□□ 0.62
PRKCA-203ENST00000578063 BBS5Q8N3I7 341 aa18.9■□□□□ 0.62
PRKCA-203ENST00000578063 ATP11CQ8NB49 1132 aa18.9■□□□□ 0.62
PRKCA-203ENST00000578063 MLPHQ9BV36 600 aaPredicted RBP18.9■□□□□ 0.62
PRKCA-203ENST00000578063 SHROOM3Q8TF72 1996 aa18.9■□□□□ 0.62
PRKCA-203ENST00000578063 DOCK6Q96HP0 2047 aa18.89■□□□□ 0.62
PRKCA-203ENST00000578063 LAMA3Q16787 3333 aa18.89■□□□□ 0.62
PRKCA-203ENST00000578063 SLC9A3R1O14745 358 aaPredicted RBP18.89■□□□□ 0.61
PRKCA-203ENST00000578063 GEMP55040 296 aa18.89■□□□□ 0.61
PRKCA-203ENST00000578063 ZNF844Q08AG5 666 aa18.89■□□□□ 0.61
PRKCA-203ENST00000578063 CBX2Q14781 532 aaPredicted RBP18.89■□□□□ 0.61
PRKCA-203ENST00000578063 TPGS1Q6ZTW0 290 aa18.89■□□□□ 0.61
PRKCA-203ENST00000578063 OTOP3Q7RTS5 596 aa18.89■□□□□ 0.61
PRKCA-203ENST00000578063 CROCCP2Q86T23 111 aa18.89■□□□□ 0.61
PRKCA-203ENST00000578063 NPAS3Q8IXF0 933 aa18.89■□□□□ 0.61
PRKCA-203ENST00000578063 FBXO36Q8NEA4 188 aa18.89■□□□□ 0.61
PRKCA-203ENST00000578063 SH3GL2Q99962 352 aa18.89■□□□□ 0.61
PRKCA-203ENST00000578063 SLC25A51Q9H1U9 297 aa18.89■□□□□ 0.61
PRKCA-203ENST00000578063 NT5MQ9NPB1 228 aa18.89■□□□□ 0.61
PRKCA-203ENST00000578063 UBA2Q9UBT2 640 aaPredicted RBP18.89■□□□□ 0.61
PRKCA-203ENST00000578063 CHD5Q8TDI0 1954 aa18.89■□□□□ 0.61
PRKCA-203ENST00000578063 GOLGA6L10A6NI86 522 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 AP3B1O00203 1094 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 BANF1O75531 89 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 ZNF235Q14590 738 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 CEP85LQ5SZL2 805 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 UBAP2Q5T6F2 1119 aaKnown RBP18.88■□□□□ 0.61
PRKCA-203ENST00000578063 FYB2Q5VWT5 728 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 NAPEPLDQ6IQ20 393 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 POTEHQ6S545 545 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 ANKMY2Q8IV38 441 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 KRT222Q8N1A0 295 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 ZNF557Q8N988 423 aaPredicted RBP18.88■□□□□ 0.61
PRKCA-203ENST00000578063 OR2W6PQ8NHA6 318 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 OXNAD1Q96HP4 312 aaPredicted RBP18.88■□□□□ 0.61
PRKCA-203ENST00000578063 WDR83Q9BRX9 315 aaKnown RBP18.88■□□□□ 0.61
PRKCA-203ENST00000578063 GDE1Q9NZC3 331 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 OGFRQ9NZT2 677 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.88■□□□□ 0.61
PRKCA-203ENST00000578063 TEX264Q9Y6I9 313 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 A0A087WUV0 522 aaPredicted RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms