RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 FAM124AQ86V42 546 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 RFFLQ8WZ73 363 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 HMCESQ96FZ2 354 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 TOE1Q96GM8 510 aaKnown RBP16.03■□□□□ 0.16
NCBP3-207ENST00000577169 SLC39A8Q9C0K1 460 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 PCDH18Q9HCL0 1135 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.03■□□□□ 0.16
NCBP3-207ENST00000577169 DONSONQ9NYP3 566 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 TFR2Q9UP52 801 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 CEP192Q8TEP8 1941 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 SPAG17Q6Q759 2223 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 MCF2LO15068 1137 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 MID1O15344 667 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 BUB1O43683 1085 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 EPN2O95208 641 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 NDUFA10O95299 355 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 IL1BP01584 269 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 IGLV3-19P01714 112 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 GJC1P36383 396 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 ARL4AP40617 200 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 NOP2P46087 812 aaKnown RBP16.02■□□□□ 0.16
NCBP3-207ENST00000577169 SERPINH1P50454 418 aaKnown RBP16.02■□□□□ 0.16
NCBP3-207ENST00000577169 CLCN6P51797 869 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 NDST2P52849 883 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 SERINC3Q13530 473 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 DPYSQ14117 519 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 CST6Q15828 149 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 ARMCX6Q7L4S7 300 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 NETO2Q8NC67 525 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 GANCQ8TET4 914 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 OR8D1Q8WZ84 308 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 CELF6Q96J87 481 aaKnown RBP16.02■□□□□ 0.16
NCBP3-207ENST00000577169 BAG1Q99933 345 aaPredicted RBP16.02■□□□□ 0.16
NCBP3-207ENST00000577169 TNKS2Q9H2K2 1166 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 PABPC3Q9H361 631 aaKnown RBP16.02■□□□□ 0.16
NCBP3-207ENST00000577169 LRRC19Q9H756 370 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 NCKAP1Q9Y2A7 1128 aa16.02■□□□□ 0.16
NCBP3-207ENST00000577169 FCF1Q9Y324 198 aaKnown RBP16.02■□□□□ 0.16
NCBP3-207ENST00000577169 FARP1Q9Y4F1 1045 aaPredicted RBP16.02■□□□□ 0.16
NCBP3-207ENST00000577169 SDK1Q7Z5N4 2213 aa16.02■□□□□ 0.15
NCBP3-207ENST00000577169 RALGAPA1Q6GYQ0 2036 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 CXorf51AA0A1B0GTR3 108 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 BCLAF3A2AJT9 711 aaKnown RBP16.01■□□□□ 0.15
NCBP3-207ENST00000577169 ZNF821O75541 412 aaPredicted RBP16.01■□□□□ 0.15
NCBP3-207ENST00000577169 TGM1P22735 817 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 IL4RP24394 825 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 MAN1A1P33908 653 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 PTGER3P43115 390 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 PSMD8P48556 350 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 DNA2P51530 1060 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 ARSEP51690 589 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 CDH6P55285 790 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 CREB5Q02930 508 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 KRT81Q14533 505 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 ELAVL3Q14576 367 aaKnown RBP16.01■□□□□ 0.15
NCBP3-207ENST00000577169 CCDC6Q16204 474 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 PARP15Q460N3 678 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 SPDYCQ5MJ68 293 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 C22orf39Q6P5X5 142 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 TMEM139Q8IV31 216 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 SLC41A1Q8IVJ1 513 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 KCTD6Q8NC69 237 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 OR2A12Q8NGT7 310 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 FAM71BQ8TC56 605 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 ZNF419Q96HQ0 510 aaPredicted RBP16.01■□□□□ 0.15
NCBP3-207ENST00000577169 CSPG4P5Q96PW8 444 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 GPR174Q9BXC1 333 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 NEUROG2Q9H2A3 272 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 PARD6AQ9NPB6 346 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 ETNK2Q9NVF9 386 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 FBXL12Q9NXK8 326 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 SARDHQ9UL12 918 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 PPM1HQ9ULR3 514 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 SCML1Q9UN30 329 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 MFHAS1Q9Y4C4 1052 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 PCDHGA5Q9Y5G8 931 aa16.01■□□□□ 0.15
NCBP3-207ENST00000577169 A0A1W2PP55 124 aa16■□□□□ 0.15
NCBP3-207ENST00000577169 CD48P09326 243 aa16■□□□□ 0.15
NCBP3-207ENST00000577169 C5AR1P21730 350 aa16■□□□□ 0.15
NCBP3-207ENST00000577169 CHRNA3P32297 505 aa16■□□□□ 0.15
NCBP3-207ENST00000577169 ACSL1P33121 698 aa16■□□□□ 0.15
NCBP3-207ENST00000577169 PAPOLAP51003 745 aaKnown RBP16■□□□□ 0.15
NCBP3-207ENST00000577169 GEMIN4P57678 1058 aaKnown RBP16■□□□□ 0.15
NCBP3-207ENST00000577169 ZNF33AQ06730 810 aa16■□□□□ 0.15
NCBP3-207ENST00000577169 MMRN1Q13201 1228 aa16■□□□□ 0.15
NCBP3-207ENST00000577169 TTC31Q49AM3 519 aaPredicted RBP16■□□□□ 0.15
NCBP3-207ENST00000577169 CARD16Q5EG05 197 aa16■□□□□ 0.15
NCBP3-207ENST00000577169 AFMIDQ63HM1 303 aa16■□□□□ 0.15
NCBP3-207ENST00000577169 USP30Q70CQ3 517 aa16■□□□□ 0.15
NCBP3-207ENST00000577169 DSG4Q86SJ6 1040 aa16■□□□□ 0.15
NCBP3-207ENST00000577169 ARHGAP12Q8IWW6 846 aa16■□□□□ 0.15
NCBP3-207ENST00000577169 KIAA2013Q8IYS2 634 aa16■□□□□ 0.15
NCBP3-207ENST00000577169 HDDC3Q8N4P3 179 aa16■□□□□ 0.15
NCBP3-207ENST00000577169 PCDH20Q8N6Y1 951 aaKnown RBP16■□□□□ 0.15
NCBP3-207ENST00000577169 CHST14Q8NCH0 376 aa16■□□□□ 0.15
NCBP3-207ENST00000577169 PIP4K2CQ8TBX8 421 aa16■□□□□ 0.15
NCBP3-207ENST00000577169 TSC1Q92574 1164 aa16■□□□□ 0.15
NCBP3-207ENST00000577169 PIGKQ92643 395 aa16■□□□□ 0.15
NCBP3-207ENST00000577169 OMDQ99983 421 aa16■□□□□ 0.15
NCBP3-207ENST00000577169 CEP44Q9C0F1 390 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms