RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 RYBPQ8N488 228 aaPredicted RBP15.6■□□□□ 0.09
SMG6-220ENST00000576218 HDDC3Q8N4P3 179 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 ZCCHC9Q8N567 271 aaKnown RBP15.6■□□□□ 0.09
SMG6-220ENST00000576218 CTNNBL1Q8WYA6 563 aaPredicted RBP15.6■□□□□ 0.09
SMG6-220ENST00000576218 MAGEB5Q9BZ81 275 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 PCED1AQ9H1Q7 454 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 MAGEH1Q9H213 219 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 TNKS2Q9H2K2 1166 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 TMEM9BQ9NQ34 198 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 CTTNBP2NLQ9P2B4 639 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 ARHGAP20Q9P2F6 1191 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 ANAPC7Q9UJX3 599 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 SLC6A14Q9UN76 642 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 NUP205Q92621 2012 aa15.6■□□□□ 0.09
SMG6-220ENST00000576218 EIF3CLB5ME19 914 aaKnown RBP15.59■□□□□ 0.09
SMG6-220ENST00000576218 K7ERQ8 282 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 ALOX15BO15296 676 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 MFAP3LO75121 409 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 MT-CO1P00395 513 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 MIPP30301 263 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 HTR7P34969 479 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 ACVRL1P37023 503 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 SERPINH1P50454 418 aaKnown RBP15.59■□□□□ 0.09
SMG6-220ENST00000576218 VASPP50552 380 aaPredicted RBP15.59■□□□□ 0.09
SMG6-220ENST00000576218 ADKP55263 362 aaKnown RBP15.59■□□□□ 0.09
SMG6-220ENST00000576218 IRX4P78413 519 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 SLC20A2Q08357 652 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 PIGHQ14442 188 aaPredicted RBP15.59■□□□□ 0.09
SMG6-220ENST00000576218 UAP1L1Q3KQV9 507 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 STPG1Q5TH74 334 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 DAB2IPQ5VWQ8 1189 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 NLRP14Q86W24 1093 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 RTL3Q8N8U3 475 aaKnown RBP15.59■□□□□ 0.09
SMG6-220ENST00000576218 OR14C36Q8NHC7 312 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 GRIN3AQ8TCU5 1115 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 FRS2Q8WU20 508 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 CCDC42Q96M95 316 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 FAM129BQ96TA1 746 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 EIF3CQ99613 913 aaKnown RBP15.59■□□□□ 0.09
SMG6-220ENST00000576218 DNAJC7Q99615 494 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 SNRNP25Q9BV90 132 aaKnown RBP15.59■□□□□ 0.09
SMG6-220ENST00000576218 TRIM7Q9C029 511 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 C6orf106Q9H6K1 298 aaPredicted RBP15.59■□□□□ 0.09
SMG6-220ENST00000576218 RXFP3Q9NSD7 469 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 ABHD10Q9NUJ1 306 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 IP6K2Q9UHH9 426 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 EIF2B4Q9UI10 523 aaKnown RBP15.59■□□□□ 0.09
SMG6-220ENST00000576218 FZD4Q9ULV1 537 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 SPTBN4Q9H254 2564 aa15.59■□□□□ 0.09
SMG6-220ENST00000576218 CEP250Q9BV73 2442 aa15.58■□□□□ 0.09
SMG6-220ENST00000576218 A0A1B0GTW7 788 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 METTL12A8MUP2 240 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 AKR1B15C9JRZ8 316 aaPredicted RBP15.58■□□□□ 0.08
SMG6-220ENST00000576218 MYO1FO00160 1098 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 KPNA3O00505 521 aaPredicted RBP15.58■□□□□ 0.08
SMG6-220ENST00000576218 SLC30A4O14863 429 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 MCF2LO15068 1137 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 BUB1O43683 1085 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 PRNPP04156 253 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 SYPP08247 313 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 SERPINF2P08697 491 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 GOT1P17174 413 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 ENGP17813 658 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 CCDC15Q0P6D6 951 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 ACAP1Q15027 740 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 SLC23A3Q6PIS1 610 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.58■□□□□ 0.08
SMG6-220ENST00000576218 ADAT2Q7Z6V5 191 aaKnown RBP15.58■□□□□ 0.08
SMG6-220ENST00000576218 PIP4K2CQ8TBX8 421 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 HSPH1Q92598 858 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 ARHGEF2Q92974 986 aaKnown RBP15.58■□□□□ 0.08
SMG6-220ENST00000576218 PPP1R16AQ96I34 528 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 ANP32EQ9BTT0 268 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 CEP44Q9C0F1 390 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 NEUROG2Q9H2A3 272 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 ZWILCHQ9H900 591 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 NDFIP2Q9NV92 336 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 ZNF212Q9UDV6 495 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 SERGEFQ9UGK8 458 aa15.58■□□□□ 0.08
SMG6-220ENST00000576218 FCF1Q9Y324 198 aaKnown RBP15.58■□□□□ 0.08
SMG6-220ENST00000576218 CEP192Q8TEP8 1941 aa15.57■□□□□ 0.08
SMG6-220ENST00000576218 TBC1D3DA0A087WVF3 549 aa15.57■□□□□ 0.08
SMG6-220ENST00000576218 TBC1D3IA0A087WXS9 549 aa15.57■□□□□ 0.08
SMG6-220ENST00000576218 TBC1D3EA0A087X179 549 aa15.57■□□□□ 0.08
SMG6-220ENST00000576218 TBC1D3KA0A087X1G2 549 aa15.57■□□□□ 0.08
SMG6-220ENST00000576218 DCDC2BA2VCK2 349 aa15.57■□□□□ 0.08
SMG6-220ENST00000576218 TBC1D3FA6NER0 549 aaPredicted RBP15.57■□□□□ 0.08
SMG6-220ENST00000576218 ZSCAN5CA6NGD5 496 aaPredicted RBP15.57■□□□□ 0.08
SMG6-220ENST00000576218 C4orf47A7E2U8 309 aa15.57■□□□□ 0.08
SMG6-220ENST00000576218 TBC1D3LB9A6J9 549 aa15.57■□□□□ 0.08
SMG6-220ENST00000576218 BCAT2O15382 392 aaPredicted RBP15.57■□□□□ 0.08
SMG6-220ENST00000576218 SMAD6O43541 496 aaKnown RBP15.57■□□□□ 0.08
SMG6-220ENST00000576218 LRCH4O75427 683 aa15.57■□□□□ 0.08
SMG6-220ENST00000576218 TBC1D3HP0C7X1 549 aa15.57■□□□□ 0.08
SMG6-220ENST00000576218 HNRNPH3P31942 346 aaKnown RBP15.57■□□□□ 0.08
SMG6-220ENST00000576218 CHRNA3P32297 505 aa15.57■□□□□ 0.08
SMG6-220ENST00000576218 GJC1P36383 396 aa15.57■□□□□ 0.08
SMG6-220ENST00000576218 ARL4AP40617 200 aa15.57■□□□□ 0.08
SMG6-220ENST00000576218 LIMK1P53667 647 aa15.57■□□□□ 0.08
SMG6-220ENST00000576218 GALCP54803 685 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms