RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 RHOBTB1O94844 696 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 LCA5LO95447 670 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 PEX11BO96011 259 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 GOT1P17174 413 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 IL4RP24394 825 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 OR1E1P30953 314 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 HOXD12P35452 270 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 ADPRHP54922 357 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 OXCT1P55809 520 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 TAS2R40P59535 323 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 PPP2CBP62714 309 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 PPP2CAP67775 309 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 CREB5Q02930 508 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 LMNB2Q03252 620 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 SULT2A1Q06520 285 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 ZNF33AQ06730 810 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 DLG2Q15700 870 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 C6orf118Q5T5N4 469 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 LYSMD4Q5XG99 296 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 SDE2Q6IQ49 451 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 DCUN1D2Q6PH85 259 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 SLC23A3Q6PIS1 610 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 SLC36A4Q6YBV0 504 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 USP30Q70CQ3 517 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 LPCAT2Q7L5N7 544 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 CYP2U1Q7Z449 544 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 SYT12Q8IV01 421 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 MMAAQ8IVH4 418 aaKnown RBP8.87□□□□□ -0.99
SMG6-216ENST00000575176 DEFB119Q8N690 84 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 NETO2Q8NC67 525 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 CADM4Q8NFZ8 388 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 PRCCQ92733 491 aaPredicted RBP8.87□□□□□ -0.99
SMG6-216ENST00000575176 ARRDC3Q96B67 414 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 TRIM11Q96F44 468 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 HMCESQ96FZ2 354 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 MRFAP1L1Q96HT8 127 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 NUP85Q9BW27 656 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 RETREG1Q9H6L5 497 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 OSGEPQ9NPF4 335 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 SPTLC3Q9NUV7 552 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 DNAI1Q9UI46 699 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 RAB23Q9ULC3 237 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 PLA2G4CQ9UP65 541 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.87□□□□□ -0.99
SMG6-216ENST00000575176 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.87□□□□□ -0.99
SMG6-216ENST00000575176 ZNF106Q9H2Y7 1883 aaKnown RBP8.87□□□□□ -0.99
SMG6-216ENST00000575176 MYLKQ15746 1914 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 PCNX2A6NKB5 2137 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 A0A1W2PP55 124 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 METTL12A8MUP2 240 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 SLC30A4O14863 429 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 WNT9AO14904 365 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 CBFA2T2O43439 604 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 LATO43561 262 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 SYNCRIPO60506 623 aaKnown RBP8.86□□□□□ -0.99
SMG6-216ENST00000575176 MOCS3O95396 460 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 CD48P09326 243 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 RARAP10276 462 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 HTR7P34969 479 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 PSMD8P48556 350 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 DHPSP49366 369 aaPredicted RBP8.86□□□□□ -0.99
SMG6-216ENST00000575176 CLCN6P51797 869 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 ZNF75DP51815 510 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 IRX4P78413 519 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 SERINC3Q13530 473 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 TCEAL1Q15170 157 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 RSPO4Q2I0M5 234 aaPredicted RBP8.86□□□□□ -0.99
SMG6-216ENST00000575176 SMTNL2Q2TAL5 461 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 EFHC2Q5JST6 749 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 KCNT1Q5JUK3 1230 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 LRRC31Q6UY01 552 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 DPY19L3Q6ZPD9 716 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 ARHGAP36Q6ZRI8 547 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 RFX8Q6ZV50 586 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 PSTKQ8IV42 348 aaKnown RBP8.86□□□□□ -0.99
SMG6-216ENST00000575176 PGBD3Q8N328 593 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 OR8K1Q8NGG5 319 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 ZNF564Q8TBZ8 553 aaPredicted RBP8.86□□□□□ -0.99
SMG6-216ENST00000575176 BIRC7Q96CA5 298 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 C2orf49Q9BVC5 232 aaPredicted RBP8.86□□□□□ -0.99
SMG6-216ENST00000575176 GPR174Q9BXC1 333 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 CEP44Q9C0F1 390 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 MUC3BQ9H195 1237 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 PCED1AQ9H1Q7 454 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 MAGEH1Q9H213 219 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 ATP13A1Q9HD20 1204 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 CWC15Q9P013 229 aaKnown RBP8.86□□□□□ -0.99
SMG6-216ENST00000575176 MYO1AQ9UBC5 1043 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 LHX3Q9UBR4 397 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 SUN2Q9UH99 717 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 PCSK1NQ9UHG2 260 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 ANAPC7Q9UJX3 599 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 FZD4Q9ULV1 537 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 USP18Q9UMW8 372 aa8.86□□□□□ -0.99
SMG6-216ENST00000575176 FCF1Q9Y324 198 aaKnown RBP8.86□□□□□ -0.99
SMG6-216ENST00000575176 REXO2Q9Y3B8 237 aaKnown RBP8.86□□□□□ -0.99
SMG6-216ENST00000575176 ITPR1Q14643 2758 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 IGF2RP11717 2491 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 RCCD1A6NED2 376 aa8.85□□□□□ -0.99
SMG6-216ENST00000575176 C3orf70A6NLC5 250 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms