RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 STXBP5Q5T5C0 1151 aa14.3□□□□□ -0.12
VPS33B-208ENST00000574755 ANKS3Q6ZW76 656 aa14.3□□□□□ -0.12
VPS33B-208ENST00000574755 MTDHQ86UE4 582 aaKnown RBP14.3□□□□□ -0.12
VPS33B-208ENST00000574755 KIF2BQ8N4N8 673 aa14.3□□□□□ -0.12
VPS33B-208ENST00000574755 DCLK2Q8N568 766 aa14.3□□□□□ -0.12
VPS33B-208ENST00000574755 AZIN2Q96A70 460 aa14.3□□□□□ -0.12
VPS33B-208ENST00000574755 ZNF778Q96MU6 729 aa14.3□□□□□ -0.12
VPS33B-208ENST00000574755 PPP1R2P1Q96PQ5 205 aa14.3□□□□□ -0.12
VPS33B-208ENST00000574755 FICDQ9BVA6 458 aa14.3□□□□□ -0.12
VPS33B-208ENST00000574755 SNX15Q9NRS6 342 aa14.3□□□□□ -0.12
VPS33B-208ENST00000574755 FNIP2Q9P278 1114 aa14.3□□□□□ -0.12
VPS33B-208ENST00000574755 TRIM33Q9UPN9 1127 aa14.3□□□□□ -0.12
VPS33B-208ENST00000574755 FNDC1Q4ZHG4 1894 aaPredicted RBP14.29□□□□□ -0.12
VPS33B-208ENST00000574755 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.29□□□□□ -0.12
VPS33B-208ENST00000574755 GOLGA8TH3BQL2 631 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 H7C4K7 107 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 NQO1P15559 274 aaKnown RBP14.29□□□□□ -0.12
VPS33B-208ENST00000574755 RHOQP17081 205 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 TARSP26639 723 aaKnown RBP14.29□□□□□ -0.12
VPS33B-208ENST00000574755 VEGFBP49765 207 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 APLP1P51693 650 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 LIMK2P53671 638 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 ELF3P78545 371 aaPredicted RBP14.29□□□□□ -0.12
VPS33B-208ENST00000574755 POU6F1Q14863 301 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 TRIP4Q15650 581 aaPredicted RBP14.29□□□□□ -0.12
VPS33B-208ENST00000574755 PPM1JQ5JR12 505 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 RASIP1Q5U651 963 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 FSTL4Q6MZW2 842 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 CCDC91Q7Z6B0 441 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 CMC1Q7Z7K0 106 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 UMODL1-AS1Q8N2C9 162 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 PPP1R14CQ8TAE6 165 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 RAB3IL1Q8TBN0 382 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 C7orf26Q96N11 449 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 TTPALQ9BTX7 342 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 TMEM120AQ9BXJ8 343 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 NOL6Q9H6R4 1146 aaKnown RBP14.29□□□□□ -0.12
VPS33B-208ENST00000574755 PRDM5Q9NQX1 630 aaPredicted RBP14.29□□□□□ -0.12
VPS33B-208ENST00000574755 IARS2Q9NSE4 1012 aaKnown RBP14.29□□□□□ -0.12
VPS33B-208ENST00000574755 PMPCBO75439 489 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 ATP5HO75947 161 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 CNTN5O94779 1100 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 VNN2O95498 520 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 HAPLN1P10915 354 aaPredicted RBP14.29□□□□□ -0.12
VPS33B-208ENST00000574755 NDST2P52849 883 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 CCL23P55773 120 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 SMARCB1Q12824 385 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 MPP3Q13368 585 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 FASTKD1Q53R41 847 aaKnown RBP14.29□□□□□ -0.12
VPS33B-208ENST00000574755 ALFQ53S48 1182 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 RAP1GAP2Q684P5 730 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 PRSS55Q6UWB4 352 aaPredicted RBP14.29□□□□□ -0.12
VPS33B-208ENST00000574755 ZCCHC23Q6ZST2 131 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 ASRGL1Q7L266 308 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 TAS1R1Q7RTX1 841 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 ZNF354CQ86Y25 554 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 PARP9Q8IXQ6 854 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 ZNF683Q8IZ20 524 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 GIPC2Q8TF65 315 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 SPATA17Q96L03 361 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 TMEM175Q9BSA9 504 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 KIFC1Q9BW19 673 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 KCNK13Q9HB14 408 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 TMEM248Q9NWD8 314 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 DONSONQ9NYP3 566 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 PPARGC1AQ9UBK2 798 aaKnown RBP14.29□□□□□ -0.12
VPS33B-208ENST00000574755 HEY2Q9UBP5 337 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 EMCNQ9ULC0 261 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 MTO1Q9Y2Z2 717 aaKnown RBP14.29□□□□□ -0.12
VPS33B-208ENST00000574755 CDY1Q9Y6F8 540 aa14.29□□□□□ -0.12
VPS33B-208ENST00000574755 SLC12A8A0AV02 714 aa14.28□□□□□ -0.12
VPS33B-208ENST00000574755 E2F8A0AVK6 867 aa14.28□□□□□ -0.12
VPS33B-208ENST00000574755 TBC1D4O60343 1298 aa14.28□□□□□ -0.12
VPS33B-208ENST00000574755 ABCG1P45844 678 aa14.28□□□□□ -0.12
VPS33B-208ENST00000574755 SERPINB8P50452 374 aa14.28□□□□□ -0.12
VPS33B-208ENST00000574755 PCID2Q5JVF3 399 aa14.28□□□□□ -0.12
VPS33B-208ENST00000574755 CES4AQ5XG92 561 aa14.28□□□□□ -0.12
VPS33B-208ENST00000574755 PDPK2PQ6A1A2 396 aa14.28□□□□□ -0.12
VPS33B-208ENST00000574755 KDELC2Q7Z4H8 507 aa14.28□□□□□ -0.12
VPS33B-208ENST00000574755 CLNKQ7Z7G1 428 aa14.28□□□□□ -0.12
VPS33B-208ENST00000574755 CRIPAKQ8N1N5 446 aa14.28□□□□□ -0.12
VPS33B-208ENST00000574755 HMCESQ96FZ2 354 aa14.28□□□□□ -0.12
VPS33B-208ENST00000574755 DEFB118Q96PH6 123 aa14.28□□□□□ -0.12
VPS33B-208ENST00000574755 ENTPD7Q9NQZ7 604 aa14.28□□□□□ -0.12
VPS33B-208ENST00000574755 ARHGEF3Q9NR81 526 aa14.28□□□□□ -0.12
VPS33B-208ENST00000574755 HAO1Q9UJM8 370 aa14.28□□□□□ -0.12
VPS33B-208ENST00000574755 MYLKQ15746 1914 aa14.28□□□□□ -0.12
VPS33B-208ENST00000574755 MIA3Q5JRA6 1907 aa14.28□□□□□ -0.12
VPS33B-208ENST00000574755 TIMM44O43615 452 aa14.27□□□□□ -0.12
VPS33B-208ENST00000574755 PLIN3O60664 434 aa14.27□□□□□ -0.12
VPS33B-208ENST00000574755 MYL2P10916 166 aa14.27□□□□□ -0.12
VPS33B-208ENST00000574755 RENBPP51606 427 aa14.27□□□□□ -0.12
VPS33B-208ENST00000574755 ATN1P54259 1190 aaPredicted RBP14.27□□□□□ -0.12
VPS33B-208ENST00000574755 RPL10AP62906 217 aaKnown RBP14.27□□□□□ -0.12
VPS33B-208ENST00000574755 OCRLQ01968 901 aa14.27□□□□□ -0.12
VPS33B-208ENST00000574755 SLC20A2Q08357 652 aa14.27□□□□□ -0.12
VPS33B-208ENST00000574755 STX3Q13277 289 aa14.27□□□□□ -0.12
VPS33B-208ENST00000574755 INSCQ1MX18 579 aa14.27□□□□□ -0.12
VPS33B-208ENST00000574755 FBXL22Q6P050 247 aa14.27□□□□□ -0.12
VPS33B-208ENST00000574755 ARID3BQ8IVW6 561 aaPredicted RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms