RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 TBC1D3LB9A6J9 549 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 CBX4O00257 560 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 CBFA2T3O75081 653 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 ZMPSTE24O75844 475 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 CER1O95813 267 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 TBC1D3HP0C7X1 549 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 KRT3P12035 628 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 ADRA1BP35368 520 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 CTSKP43235 329 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 NSFP46459 744 aaKnown RBP11.59□□□□□ -0.55
RPAIN-214ENST00000574003 GRIA4P48058 902 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 RPL7AP62424 266 aaKnown RBP11.59□□□□□ -0.55
RPAIN-214ENST00000574003 ARF5P84085 180 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 TEAD4Q15561 434 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 MANEALQ5VSG8 457 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 AGBL4Q5VU57 503 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 TBC1D3GQ6DHY5 549 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 TBC1D3CQ6IPX1 549 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 LRSAM1Q6UWE0 723 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 ARCQ7LC44 396 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 ADAT2Q7Z6V5 191 aaKnown RBP11.59□□□□□ -0.55
RPAIN-214ENST00000574003 SLCO6A1Q86UG4 719 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 PHF13Q86YI8 300 aaPredicted RBP11.59□□□□□ -0.55
RPAIN-214ENST00000574003 MARCH9Q86YJ5 346 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 GATAD2AQ86YP4 633 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 TBC1D3Q8IZP1 549 aaPredicted RBP11.59□□□□□ -0.55
RPAIN-214ENST00000574003 DCAF4L2Q8NA75 395 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 OR2A12Q8NGT7 310 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 GRIN3AQ8TCU5 1115 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 BAP1Q92560 729 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 MYOCQ99972 504 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 TMEM121BQ9BXQ6 578 aaPredicted RBP11.59□□□□□ -0.55
RPAIN-214ENST00000574003 ZYG11BQ9C0D3 744 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 RTN4Q9NQC3 1192 aaKnown RBP11.59□□□□□ -0.55
RPAIN-214ENST00000574003 AASDHPPTQ9NRN7 309 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 OR12D3Q9UGF7 316 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 DNAI1Q9UI46 699 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 PCOLCE2Q9UKZ9 415 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 NEU3Q9UQ49 428 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 HS3ST2Q9Y278 367 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 PAXBP1Q9Y5B6 917 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 PCDHB9Q9Y5E1 797 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 ARID1BQ8NFD5 2236 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-214ENST00000574003 A0A1W2PR77 199 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 KPNA3O00505 521 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-214ENST00000574003 MCF2LO15068 1137 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 CCP110O43303 1012 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 ATMINO43313 823 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-214ENST00000574003 ZNF821O75541 412 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-214ENST00000574003 LRIG2O94898 1065 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 CD160O95971 181 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 PLEKP08567 350 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-214ENST00000574003 FTH1P19P0C7X4 201 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 GPD1P21695 349 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 GKP32189 559 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 CHRNA3P32297 505 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 PTPN9P43378 593 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 VASPP50552 380 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-214ENST00000574003 DNA2P51530 1060 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 CCR5P51681 352 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 C21orf59P57076 290 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 TAS2R38P59533 333 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 KRT83P78385 493 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 OGDHQ02218 1023 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 GNA12Q03113 381 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 MTA1Q13330 715 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 SLC14A1Q13336 389 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 SHBQ15464 509 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 ARSIQ5FYB1 569 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 C6orf118Q5T5N4 469 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 SCYL2Q6P3W7 929 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 C22orf39Q6P5X5 142 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 IL27RAQ6UWB1 636 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 DPY19L3Q6ZPD9 716 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 IRF2BP2Q7Z5L9 587 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 SETD3Q86TU7 594 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-214ENST00000574003 OR6K2Q8NGY2 324 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 RHBDD1Q8TEB9 315 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 CENPIQ92674 756 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-214ENST00000574003 SERAC1Q96JX3 654 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 MCEEQ96PE7 176 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 PPP1R9BQ96SB3 815 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 FUCA2Q9BTY2 467 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 C2orf49Q9BVC5 232 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-214ENST00000574003 ATP13A1Q9HD20 1204 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 OSGEPQ9NPF4 335 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 GPATCH2LQ9NWQ4 482 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 ARHGAP20Q9P2F6 1191 aa11.58□□□□□ -0.56
RPAIN-214ENST00000574003 TDRD6O60522 2096 aaKnown RBP11.58□□□□□ -0.56
RPAIN-214ENST00000574003 KMT2BQ9UMN6 2715 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-214ENST00000574003 ILVBLA1L0T0 632 aa11.57□□□□□ -0.56
RPAIN-214ENST00000574003 LRRC53A6NM62 1247 aa11.57□□□□□ -0.56
RPAIN-214ENST00000574003 C1QTNF3-AMACRE9PGA6 284 aa11.57□□□□□ -0.56
RPAIN-214ENST00000574003 PLRG1O43660 514 aaKnown RBP11.57□□□□□ -0.56
RPAIN-214ENST00000574003 CALB1P05937 261 aa11.57□□□□□ -0.56
RPAIN-214ENST00000574003 ATXN1LP0C7T5 689 aaKnown RBP11.57□□□□□ -0.56
RPAIN-214ENST00000574003 PRLRP16471 622 aa11.57□□□□□ -0.56
RPAIN-214ENST00000574003 RACK1P63244 317 aaKnown RBP11.57□□□□□ -0.56
RPAIN-214ENST00000574003 IQCB1Q15051 598 aa11.57□□□□□ -0.56
RPAIN-214ENST00000574003 ZNF423Q2M1K9 1284 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms