RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 C6orf118Q5T5N4 469 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 E4F1Q66K89 784 aaPredicted RBP17.85■□□□□ 0.45
SMG6-214ENST00000573827 WDR59Q6PJI9 974 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 IL27RAQ6UWB1 636 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 LRRC31Q6UY01 552 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 ZNF783Q6ZMS7 281 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 NAXDQ8IW45 347 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 CCDC185Q8N715 623 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 C3orf20Q8ND61 904 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 OR8D1Q8WZ84 308 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 TMEM131Q92545 1883 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 OMDQ99983 421 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 C2orf49Q9BVC5 232 aaPredicted RBP17.85■□□□□ 0.45
SMG6-214ENST00000573827 NDFIP2Q9NV92 336 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 ARHGAP20Q9P2F6 1191 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 PCOLCE2Q9UKZ9 415 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 PCDHGB2Q9Y5G2 931 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 ITPR1Q14643 2758 aa17.85■□□□□ 0.45
SMG6-214ENST00000573827 FAM47DPA6NHR8 397 aa17.84■□□□□ 0.45
SMG6-214ENST00000573827 LRRC72A6NJI9 287 aa17.84■□□□□ 0.45
SMG6-214ENST00000573827 SIGLEC16A6NMB1 481 aa17.84■□□□□ 0.45
SMG6-214ENST00000573827 SLC7A4O43246 635 aa17.84■□□□□ 0.45
SMG6-214ENST00000573827 PLRG1O43660 514 aaKnown RBP17.84■□□□□ 0.45
SMG6-214ENST00000573827 SRGAP2O75044 1071 aa17.84■□□□□ 0.45
SMG6-214ENST00000573827 RTN2O75298 545 aa17.84■□□□□ 0.45
SMG6-214ENST00000573827 CER1O95813 267 aa17.84■□□□□ 0.45
SMG6-214ENST00000573827 KRT3P12035 628 aa17.84■□□□□ 0.45
SMG6-214ENST00000573827 RRM1P23921 792 aa17.84■□□□□ 0.45
SMG6-214ENST00000573827 OR1E1P30953 314 aa17.84■□□□□ 0.45
SMG6-214ENST00000573827 ARF5P84085 180 aa17.84■□□□□ 0.45
SMG6-214ENST00000573827 C1QBPQ07021 282 aaKnown RBP17.84■□□□□ 0.45
SMG6-214ENST00000573827 SCAPQ12770 1279 aa17.84■□□□□ 0.45
SMG6-214ENST00000573827 CNTN1Q12860 1018 aa17.84■□□□□ 0.45
SMG6-214ENST00000573827 IQCB1Q15051 598 aa17.84■□□□□ 0.45
SMG6-214ENST00000573827 CDO1Q16878 200 aa17.84■□□□□ 0.45
SMG6-214ENST00000573827 LINGO4Q6UY18 593 aa17.84■□□□□ 0.45
SMG6-214ENST00000573827 NTAN1Q96AB6 310 aa17.84■□□□□ 0.45
SMG6-214ENST00000573827 ACE2Q9BYF1 805 aaPredicted RBP17.84■□□□□ 0.45
SMG6-214ENST00000573827 ZYG11BQ9C0D3 744 aa17.84■□□□□ 0.45
SMG6-214ENST00000573827 TM7SF3Q9NS93 570 aa17.84■□□□□ 0.45
SMG6-214ENST00000573827 TAS2R14Q9NYV8 317 aa17.84■□□□□ 0.45
SMG6-214ENST00000573827 OR12D3Q9UGF7 316 aa17.84■□□□□ 0.45
SMG6-214ENST00000573827 KNTC1P50748 2209 aa17.83■□□□□ 0.45
SMG6-214ENST00000573827 H0Y8X5 98 aa17.83■□□□□ 0.44
SMG6-214ENST00000573827 KCNK3O14649 394 aa17.83■□□□□ 0.44
SMG6-214ENST00000573827 VILLO15195 856 aa17.83■□□□□ 0.44
SMG6-214ENST00000573827 LRIG2O94898 1065 aa17.83■□□□□ 0.44
SMG6-214ENST00000573827 CLCN6P51797 869 aa17.83■□□□□ 0.44
SMG6-214ENST00000573827 KRT83P78385 493 aa17.83■□□□□ 0.44
SMG6-214ENST00000573827 HNRNPDQ14103 355 aaKnown RBP17.83■□□□□ 0.44
SMG6-214ENST00000573827 PIP5KL1Q5T9C9 394 aa17.83■□□□□ 0.44
SMG6-214ENST00000573827 CAVIN1Q6NZI2 390 aaKnown RBP17.83■□□□□ 0.44
SMG6-214ENST00000573827 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.83■□□□□ 0.44
SMG6-214ENST00000573827 GLRX5Q86SX6 157 aa17.83■□□□□ 0.44
SMG6-214ENST00000573827 CHST14Q8NCH0 376 aa17.83■□□□□ 0.44
SMG6-214ENST00000573827 OR14C36Q8NHC7 312 aa17.83■□□□□ 0.44
SMG6-214ENST00000573827 PIP4K2CQ8TBX8 421 aa17.83■□□□□ 0.44
SMG6-214ENST00000573827 FAM172AQ8WUF8 416 aa17.83■□□□□ 0.44
SMG6-214ENST00000573827 PCMTD1Q96MG8 357 aaPredicted RBP17.83■□□□□ 0.44
SMG6-214ENST00000573827 TTYH3Q9C0H2 523 aa17.83■□□□□ 0.44
SMG6-214ENST00000573827 MYO6Q9UM54 1294 aa17.83■□□□□ 0.44
SMG6-214ENST00000573827 A0A1B0GTH6 734 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 FAM221BA6H8Z2 402 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 DKK1O94907 266 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 CALB1P05937 261 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 ACVRL1P37023 503 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 RPL7AP62424 266 aaKnown RBP17.82■□□□□ 0.44
SMG6-214ENST00000573827 OGDHQ02218 1023 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 GNA12Q03113 381 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 SHBQ15464 509 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 TEAD4Q15561 434 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 TRIP6Q15654 476 aaKnown RBP17.82■□□□□ 0.44
SMG6-214ENST00000573827 POM121L1PQ3SYA9 428 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 ACCSLQ4AC99 568 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 C22orf39Q6P5X5 142 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 RAB44Q7Z6P3 723 aaPredicted RBP17.82■□□□□ 0.44
SMG6-214ENST00000573827 DSG4Q86SJ6 1040 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 ATP11CQ8NB49 1132 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 GATA6Q92908 595 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 ARRDC3Q96B67 414 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 NAP1L5Q96NT1 182 aaPredicted RBP17.82■□□□□ 0.44
SMG6-214ENST00000573827 SCNM1Q9BWG6 230 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 KDM4CQ9H3R0 1056 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 NOL6Q9H6R4 1146 aaKnown RBP17.82■□□□□ 0.44
SMG6-214ENST00000573827 TOR4AQ9NXH8 423 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 BTBD3Q9Y2F9 522 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 ACTL7AQ9Y615 435 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 WASF2Q9Y6W5 498 aa17.82■□□□□ 0.44
SMG6-214ENST00000573827 ACACAQ13085 2346 aa17.81■□□□□ 0.44
SMG6-214ENST00000573827 TP53BP1Q12888 1972 aaPredicted RBP17.81■□□□□ 0.44
SMG6-214ENST00000573827 CXorf51AA0A1B0GTR3 108 aa17.81■□□□□ 0.44
SMG6-214ENST00000573827 CCP110O43303 1012 aa17.81■□□□□ 0.44
SMG6-214ENST00000573827 HYAL3O43820 417 aaPredicted RBP17.81■□□□□ 0.44
SMG6-214ENST00000573827 PCDHGA12O60330 932 aa17.81■□□□□ 0.44
SMG6-214ENST00000573827 PLEKP08567 350 aaPredicted RBP17.81■□□□□ 0.44
SMG6-214ENST00000573827 FERP16591 822 aa17.81■□□□□ 0.44
SMG6-214ENST00000573827 RHOQP17081 205 aa17.81■□□□□ 0.44
SMG6-214ENST00000573827 GPD1P21695 349 aa17.81■□□□□ 0.44
SMG6-214ENST00000573827 CHRNA3P32297 505 aa17.81■□□□□ 0.44
SMG6-214ENST00000573827 SERPINH1P50454 418 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms