RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 GJB6O95452 261 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 MT-CO1P00395 513 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 CYP1A1P04798 512 aaPredicted RBP9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 CALB1P05937 261 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 CHRNB2P17787 502 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 MMP8P22894 467 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 CTSKP43235 329 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 GRK6P43250 576 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 VASPP50552 380 aaPredicted RBP9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 DNA2P51530 1060 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 CCR5P51681 352 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 TYRO3Q06418 890 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 CNTN1Q12860 1018 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 KCNT1Q5JUK3 1230 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 ZNF354CQ86Y25 554 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 ZNF683Q8IZ20 524 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 JOSD2Q8TAC2 188 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 FAM172AQ8WUF8 416 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 ZCCHC14Q8WYQ9 949 aaKnown RBP9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 PPP1R16AQ96I34 528 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 C1orf74Q96LT6 269 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 PSMB7Q99436 277 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 CDC6Q99741 560 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 ORAI3Q9BRQ5 295 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 NAT10Q9H0A0 1025 aaKnown RBP9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 TNKS2Q9H2K2 1166 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 EBF2Q9HAK2 575 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 GDF3Q9NR23 364 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 TPX2Q9ULW0 747 aaKnown RBP9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 WASF3Q9UPY6 502 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 HS3ST2Q9Y278 367 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 BTBD3Q9Y2F9 522 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 OR51B4Q9Y5P0 310 aa9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 COL5A1P20908 1838 aaPredicted RBP9.88□□□□□ -0.83
NPLOC4-212ENST00000573328 SPEGQ15772 3267 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 IGLV3-10A0A075B6K4 115 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 ILVBLA1L0T0 632 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 TMEM8BA6NDV4 472 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 DRGXA6NNA5 263 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 K7ERQ8 282 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 DFNA5O60443 496 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 CBFA2T3O75081 653 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 PRNPP04156 253 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 ITGAVP06756 1048 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 CCDC172P0C7W6 258 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 KRT3P12035 628 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 DESP17661 470 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 GPD1P21695 349 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 GLDCP23378 1020 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 CHRNA3P32297 505 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 CLCN6P51797 869 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 CCDC15Q0P6D6 951 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 CLEC16AQ2KHT3 1053 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 CCDC14Q49A88 953 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 ANO6Q4KMQ2 910 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 SETMARQ53H47 684 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 RAB6CQ53S08 254 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 PRAMEF14Q5SWL7 426 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 AGBL4Q5VU57 503 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 NAPEPLDQ6IQ20 393 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 RETSATQ6NUM9 610 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 DNAJC24Q6P3W2 148 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 ARCQ7LC44 396 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 RAB44Q7Z6P3 723 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 GATA6Q92908 595 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 ELF4Q99607 663 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 MYOCQ99972 504 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 RAB6CQ9H0N0 254 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 KDM4CQ9H3R0 1056 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 FTSJ1Q9UET6 329 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 OR12D3Q9UGF7 316 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 IL36AQ9UHA7 158 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 DNAI1Q9UI46 699 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 ZMIZ1Q9ULJ6 1067 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 PPM1HQ9ULR3 514 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 MSRB2Q9Y3D2 182 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 MYLKQ15746 1914 aa9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 GOLGA4Q13439 2230 aaKnown RBP9.87□□□□□ -0.83
NPLOC4-212ENST00000573328 A0A1B0GTQ1 180 aa9.86□□□□□ -0.83
NPLOC4-212ENST00000573328 C2CD4BA6NLJ0 364 aa9.86□□□□□ -0.83
NPLOC4-212ENST00000573328 YKT6O15498 198 aa9.86□□□□□ -0.83
NPLOC4-212ENST00000573328 SMAD6O43541 496 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-212ENST00000573328 PCDHGA12O60330 932 aa9.86□□□□□ -0.83
NPLOC4-212ENST00000573328 MAGEC1O60732 1142 aa9.86□□□□□ -0.83
NPLOC4-212ENST00000573328 RNGTTO60942 597 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-212ENST00000573328 PCDH8O95206 1070 aa9.86□□□□□ -0.83
NPLOC4-212ENST00000573328 WNT1P04628 370 aa9.86□□□□□ -0.83
NPLOC4-212ENST00000573328 CTSLP07711 333 aa9.86□□□□□ -0.83
NPLOC4-212ENST00000573328 UNGP13051 313 aaPredicted RBP9.86□□□□□ -0.83
NPLOC4-212ENST00000573328 ATP1A3P13637 1013 aa9.86□□□□□ -0.83
NPLOC4-212ENST00000573328 ADRA1BP35368 520 aa9.86□□□□□ -0.83
NPLOC4-212ENST00000573328 NUDT1P36639 197 aa9.86□□□□□ -0.83
NPLOC4-212ENST00000573328 ETFBP38117 255 aa9.86□□□□□ -0.83
NPLOC4-212ENST00000573328 PTPN9P43378 593 aa9.86□□□□□ -0.83
NPLOC4-212ENST00000573328 ARRB1P49407 418 aaPredicted RBP9.86□□□□□ -0.83
NPLOC4-212ENST00000573328 SERPINH1P50454 418 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-212ENST00000573328 GNA12Q03113 381 aa9.86□□□□□ -0.83
NPLOC4-212ENST00000573328 STAT4Q14765 748 aa9.86□□□□□ -0.83
NPLOC4-212ENST00000573328 EFHC2Q5JST6 749 aa9.86□□□□□ -0.83
NPLOC4-212ENST00000573328 SCYL2Q6P3W7 929 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms