RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 TRIM71Q2Q1W2 868 aaKnown RBP10.29□□□□□ -0.76
SMG6-213ENST00000573166 FBXL22Q6P050 247 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 CES3Q6UWW8 571 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 ARID3BQ8IVW6 561 aaPredicted RBP10.29□□□□□ -0.76
SMG6-213ENST00000573166 WDTC1Q8N5D0 677 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 ALLCQ8N6M5 410 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 RTL3Q8N8U3 475 aaKnown RBP10.29□□□□□ -0.76
SMG6-213ENST00000573166 PCDH19Q8TAB3 1148 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 ZSCAN18Q8TBC5 510 aaPredicted RBP10.29□□□□□ -0.76
SMG6-213ENST00000573166 ULK4Q96C45 1275 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 HIST1H2AHQ96KK5 128 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 NPY6RQ99463 290 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 HIST1H2AJQ99878 128 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 H2AFJQ9BTM1 129 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 MAGEH1Q9H213 219 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 SFXN1Q9H9B4 322 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 RAD54BQ9Y620 910 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 F5P12259 2224 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 TCRBV7S2A1N4TA0A589 114 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 HSPA4LO95757 839 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 GLP2RO95838 553 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 IL1R2P27930 398 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 HSPA9P38646 679 aaKnown RBP10.29□□□□□ -0.76
SMG6-213ENST00000573166 DGKGP49619 791 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 MLLT6P55198 1093 aaPredicted RBP10.29□□□□□ -0.76
SMG6-213ENST00000573166 CDK16Q00536 496 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 PTP4A2Q12974 167 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 ACOX1Q15067 660 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 C4orf33Q8N1A6 199 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 CELF5Q8N6W0 485 aaKnown RBP10.29□□□□□ -0.76
SMG6-213ENST00000573166 NIPA2Q8N8Q9 360 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 OR52K1Q8NGK4 314 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 BPIFB1Q8TDL5 484 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 MLPHQ9BV36 600 aaPredicted RBP10.29□□□□□ -0.76
SMG6-213ENST00000573166 CLPBQ9H078 707 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 SENP1Q9P0U3 644 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 WNT6Q9Y6F9 365 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 KIF13BQ9NQT8 1826 aa10.29□□□□□ -0.76
SMG6-213ENST00000573166 DICER1Q9UPY3 1922 aaKnown RBP10.29□□□□□ -0.76
SMG6-213ENST00000573166 MAGEB16A2A368 324 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 HEATR9A2RTY3 570 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 BUD23O43709 281 aaKnown RBP10.28□□□□□ -0.76
SMG6-213ENST00000573166 SYF2O95926 243 aaKnown RBP10.28□□□□□ -0.76
SMG6-213ENST00000573166 PIRTP0C851 137 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 EPCAMP16422 314 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 MAP4P27816 1152 aaKnown RBP10.28□□□□□ -0.76
SMG6-213ENST00000573166 MAPKAPK2P49137 400 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 NPY2RP49146 381 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 SERPINH1P50454 418 aaKnown RBP10.28□□□□□ -0.76
SMG6-213ENST00000573166 ATG16L1Q676U5 607 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 TXNRD3NBQ6F5E7 133 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 WDR93Q6P2C0 686 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 USP45Q70EL2 814 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 TMEM174Q8WUU8 243 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 RPL10LQ96L21 214 aaKnown RBP10.28□□□□□ -0.76
SMG6-213ENST00000573166 TRMT61BQ9BVS5 477 aaKnown RBP10.28□□□□□ -0.76
SMG6-213ENST00000573166 PCYOX1Q9UHG3 505 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 CYTH4Q9UIA0 394 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 PCDHA11Q9Y5I1 949 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 SRP72O76094 671 aaKnown RBP10.28□□□□□ -0.76
SMG6-213ENST00000573166 VAPBO95292 243 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 CYP2A6P11509 494 aaPredicted RBP10.28□□□□□ -0.76
SMG6-213ENST00000573166 TCF4P15884 667 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 HSD17B3P37058 310 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 MTHFRP42898 656 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 MLLT1Q03111 559 aaPredicted RBP10.28□□□□□ -0.76
SMG6-213ENST00000573166 DPYSL2Q16555 572 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 TEX44Q53QW1 395 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 GKAP1Q5VSY0 366 aaPredicted RBP10.28□□□□□ -0.76
SMG6-213ENST00000573166 FBXW10Q5XX13 1052 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 MRPL43Q8N983 215 aaKnown RBP10.28□□□□□ -0.76
SMG6-213ENST00000573166 PRKD2Q9BZL6 878 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 SEMA4AQ9H3S1 761 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 TMPRSS4Q9NRS4 437 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 ABCB8Q9NUT2 735 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 PCMTD2Q9NV79 361 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 PCDH10Q9P2E7 1040 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 NDRG2Q9UN36 371 aaKnown RBP10.28□□□□□ -0.76
SMG6-213ENST00000573166 TRIM49D1C9J1S8 452 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 CHEK2O96017 543 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 EPHX1P07099 455 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 CAP1Q01518 475 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 PPP1R15BQ5SWA1 713 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 NLRP9Q7RTR0 991 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 OSBPL7Q9BZF2 842 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 PPCSQ9HAB8 311 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 NMUR1Q9HB89 426 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 COCHO43405 550 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 MYOGP15173 224 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 GABRB2P47870 512 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 GUCY1A3Q02108 690 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 IFT88Q13099 833 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 SLC12A1Q13621 1099 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 NUDCD3Q8IVD9 361 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 TCEAL8Q8IYN2 117 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 FLCNQ8NFG4 579 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 SPDYE1Q8NFV5 336 aaPredicted RBP10.28□□□□□ -0.76
SMG6-213ENST00000573166 CMASQ8NFW8 434 aaPredicted RBP10.28□□□□□ -0.76
SMG6-213ENST00000573166 HMCESQ96FZ2 354 aa10.28□□□□□ -0.76
SMG6-213ENST00000573166 ATP6V1G3Q96LB4 118 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms