RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 ARHGAP18Q8N392 663 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 CARNMT1Q8N4J0 409 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 HDDC3Q8N4P3 179 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 OR2T3Q8NH03 318 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 DNASE2BQ8WZ79 361 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 TMA16Q96EY4 203 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 TRIM11Q96F44 468 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 CDK5RAP1Q96SZ6 601 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 GAREM1Q9H706 876 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 PLCB1Q9NQ66 1216 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 CNGB3Q9NQW8 809 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 ST7Q9NRC1 585 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 ABCC13Q9NSE7 274 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 COX16Q9P0S2 106 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 VTI1BQ9UEU0 232 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 MKL2Q9ULH7 1088 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 SNX11Q9Y5W9 270 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 SNX10Q9Y5X0 201 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 BPTFQ12830 3046 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 FASNP49327 2511 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 A0A1B0GTW7 788 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 GOLGA6L4A6NEF3 574 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 I6L893 689 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 PSMA7O14818 248 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 MID1O15344 667 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 BCAT2O15382 392 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 FSBPO95073 299 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 LETM1O95202 739 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 IGLV3-19P01714 112 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 WNT1P04628 370 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 CAPNS1P04632 268 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 IGHV4-34P06331 123 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 ATXN1LP0C7T5 689 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 KRT5P13647 590 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 TFE3P19532 575 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 VAMP1P23763 118 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 TBXAS1P24557 533 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 PPP2CBP62714 309 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 PPP2CAP67775 309 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 KCNJ12Q14500 433 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 EIF4HQ15056 248 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 CNGA2Q16280 664 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 CAMK4Q16566 473 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 HLA-BQ31612 363 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 POM121L1PQ3SYA9 428 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 HSP90AA4PQ58FG1 418 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 ZC3H12AQ5D1E8 599 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 MFN1Q8IWA4 741 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 DMRTC2Q8IXT2 367 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 LGI2Q8N0V4 545 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 WDTC1Q8N5D0 677 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 CEP76Q8TAP6 659 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 BAHD1Q8TBE0 780 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 UCMAQ8WVF2 138 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 FAM149B1Q96BN6 582 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 BIRC7Q96CA5 298 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 SLC39A13Q96H72 371 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 DHTKD1Q96HY7 919 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 RPL10LQ96L21 214 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 SLC6A18Q96N87 628 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 SRRTQ9BXP5 876 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 ZFYVE1Q9HBF4 777 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 TM9SF3Q9HD45 589 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 ANLNQ9NQW6 1124 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 OLA1Q9NTK5 396 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 SLCO3A1Q9UIG8 710 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 PCOLCE2Q9UKZ9 415 aa9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-210ENST00000572824 IGSF10Q6WRI0 2623 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 FAM149AA5PLN7 773 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 FAM47DPA6NHR8 397 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 UPK3BL1B0FP48 263 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 UPK3BL2E5RIL1 263 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 H0Y8X5 98 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 IRAK2O43187 625 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 SEMA4FO95754 770 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 DLDP09622 509 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 ACADMP11310 421 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 PSMD8P48556 350 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 RPL34P49207 117 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 SLC8A3P57103 927 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 YWHAEP62258 255 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 ARID5AQ03989 594 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 TRIP6Q15654 476 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 ARHGAP44Q17R89 818 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 CCDC157Q569K6 752 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 MS4A13Q5J8X5 152 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 PITRM1Q5JRX3 1037 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 WDR45BQ5MNZ6 344 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 CHSY1Q86X52 802 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 GATAD2AQ86YP4 633 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 IRF2BP1Q8IU81 584 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 AHI1Q8N157 1196 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 SCML4Q8N228 414 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 TTC39CQ8N584 583 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 AADATQ8N5Z0 425 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 C1orf131Q8NDD1 294 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 MDM1Q8TC05 714 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 SETD7Q8WTS6 366 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 CRELD1Q96HD1 420 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms