RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 CADM4Q8NFZ8 388 aa21.13■□□□□ 0.97
CHMP6-204ENST00000572778 ZNF564Q8TBZ8 553 aaPredicted RBP21.13■□□□□ 0.97
CHMP6-204ENST00000572778 CCDC114Q96M63 670 aa21.13■□□□□ 0.97
CHMP6-204ENST00000572778 KCTD15Q96SI1 283 aaPredicted RBP21.13■□□□□ 0.97
CHMP6-204ENST00000572778 SPTLC3Q9NUV7 552 aa21.13■□□□□ 0.97
CHMP6-204ENST00000572778 PILRBQ9UKJ0 227 aa21.13■□□□□ 0.97
CHMP6-204ENST00000572778 FARP1Q9Y4F1 1045 aaPredicted RBP21.13■□□□□ 0.97
CHMP6-204ENST00000572778 ABCA7Q8IZY2 2146 aa21.13■□□□□ 0.97
CHMP6-204ENST00000572778 EIF3CLB5ME19 914 aaKnown RBP21.12■□□□□ 0.97
CHMP6-204ENST00000572778 FGF10O15520 208 aaPredicted RBP21.12■□□□□ 0.97
CHMP6-204ENST00000572778 GDF9O60383 454 aa21.12■□□□□ 0.97
CHMP6-204ENST00000572778 ADH1BP00325 375 aa21.12■□□□□ 0.97
CHMP6-204ENST00000572778 C5AR1P21730 350 aa21.12■□□□□ 0.97
CHMP6-204ENST00000572778 MAOBP27338 520 aa21.12■□□□□ 0.97
CHMP6-204ENST00000572778 HTR7P34969 479 aa21.12■□□□□ 0.97
CHMP6-204ENST00000572778 SERPINH1P50454 418 aaKnown RBP21.12■□□□□ 0.97
CHMP6-204ENST00000572778 ARF5P84085 180 aa21.12■□□□□ 0.97
CHMP6-204ENST00000572778 RSPO4Q2I0M5 234 aaPredicted RBP21.12■□□□□ 0.97
CHMP6-204ENST00000572778 PPP6R3Q5H9R7 873 aaPredicted RBP21.12■□□□□ 0.97
CHMP6-204ENST00000572778 WDR45BQ5MNZ6 344 aa21.12■□□□□ 0.97
CHMP6-204ENST00000572778 CYP4V2Q6ZWL3 525 aaPredicted RBP21.12■□□□□ 0.97
CHMP6-204ENST00000572778 USP30Q70CQ3 517 aa21.12■□□□□ 0.97
CHMP6-204ENST00000572778 HDDC3Q8N4P3 179 aa21.12■□□□□ 0.97
CHMP6-204ENST00000572778 EIF3CQ99613 913 aaKnown RBP21.12■□□□□ 0.97
CHMP6-204ENST00000572778 TNKS2Q9H2K2 1166 aa21.12■□□□□ 0.97
CHMP6-204ENST00000572778 ZWILCHQ9H900 591 aa21.12■□□□□ 0.97
CHMP6-204ENST00000572778 SGK2Q9HBY8 427 aa21.12■□□□□ 0.97
CHMP6-204ENST00000572778 SERGEFQ9UGK8 458 aa21.12■□□□□ 0.97
CHMP6-204ENST00000572778 ACTL7AQ9Y615 435 aa21.12■□□□□ 0.97
CHMP6-204ENST00000572778 FRYLO94915 3013 aa21.12■□□□□ 0.97
CHMP6-204ENST00000572778 SDK1Q7Z5N4 2213 aa21.12■□□□□ 0.97
CHMP6-204ENST00000572778 WASH4PA8MWX3 477 aa21.11■□□□□ 0.97
CHMP6-204ENST00000572778 MCF2LO15068 1137 aa21.11■□□□□ 0.97
CHMP6-204ENST00000572778 SEMA4FO95754 770 aa21.11■□□□□ 0.97
CHMP6-204ENST00000572778 TCF4P15884 667 aa21.11■□□□□ 0.97
CHMP6-204ENST00000572778 IL1R2P27930 398 aa21.11■□□□□ 0.97
CHMP6-204ENST00000572778 SSR1P43307 286 aaKnown RBP21.11■□□□□ 0.97
CHMP6-204ENST00000572778 RECQLP46063 649 aaPredicted RBP21.11■□□□□ 0.97
CHMP6-204ENST00000572778 ID4P47928 161 aa21.11■□□□□ 0.97
CHMP6-204ENST00000572778 DNA2P51530 1060 aa21.11■□□□□ 0.97
CHMP6-204ENST00000572778 TRIM61Q5EBN2 209 aa21.11■□□□□ 0.97
CHMP6-204ENST00000572778 KCNT1Q5JUK3 1230 aa21.11■□□□□ 0.97
CHMP6-204ENST00000572778 DCAF12L1Q5VU92 463 aa21.11■□□□□ 0.97
CHMP6-204ENST00000572778 C22orf39Q6P5X5 142 aa21.11■□□□□ 0.97
CHMP6-204ENST00000572778 LEKR1Q6ZMV7 388 aa21.11■□□□□ 0.97
CHMP6-204ENST00000572778 PSTKQ8IV42 348 aaKnown RBP21.11■□□□□ 0.97
CHMP6-204ENST00000572778 OR2A12Q8NGT7 310 aa21.11■□□□□ 0.97
CHMP6-204ENST00000572778 HSPH1Q92598 858 aa21.11■□□□□ 0.97
CHMP6-204ENST00000572778 RMDN1Q96DB5 314 aa21.11■□□□□ 0.97
CHMP6-204ENST00000572778 NEUROG2Q9H2A3 272 aa21.11■□□□□ 0.97
CHMP6-204ENST00000572778 C6orf106Q9H6K1 298 aaPredicted RBP21.11■□□□□ 0.97
CHMP6-204ENST00000572778 NOL6Q9H6R4 1146 aaKnown RBP21.11■□□□□ 0.97
CHMP6-204ENST00000572778 RXFP3Q9NSD7 469 aa21.11■□□□□ 0.97
CHMP6-204ENST00000572778 DONSONQ9NYP3 566 aa21.11■□□□□ 0.97
CHMP6-204ENST00000572778 SARDHQ9UL12 918 aa21.11■□□□□ 0.97
CHMP6-204ENST00000572778 FCF1Q9Y324 198 aaKnown RBP21.11■□□□□ 0.97
CHMP6-204ENST00000572778 FAM47DPA6NHR8 397 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 METTL12A8MUP2 240 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 RASA4BC9J798 803 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 ALOX15BO15296 676 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 RASA4O43374 803 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 CFIP05156 583 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 GOT1P17174 413 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 YBEYP58557 167 aaPredicted RBP21.1■□□□□ 0.97
CHMP6-204ENST00000572778 IRX4P78413 519 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 SMTNL2Q2TAL5 461 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 POM121L1PQ3SYA9 428 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 BOLA3Q53S33 107 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 FAM46CQ5VWP2 391 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 AADATQ8N5Z0 425 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 NIPA2Q8N8Q9 360 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 PIP4K2CQ8TBX8 421 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 SNX19Q92543 992 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 HMCESQ96FZ2 354 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 MRFAP1L1Q96HT8 127 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 NUSAP1Q9BXS6 441 aaKnown RBP21.1■□□□□ 0.97
CHMP6-204ENST00000572778 MIR1-1HGQ9H1L0 117 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 UVRAGQ9P2Y5 699 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 CDV3Q9UKY7 258 aaKnown RBP21.1■□□□□ 0.97
CHMP6-204ENST00000572778 PPM1HQ9ULR3 514 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 THADAQ6YHU6 1953 aa21.1■□□□□ 0.97
CHMP6-204ENST00000572778 C1QTNF3-AMACRE9PGA6 284 aa21.09■□□□□ 0.97
CHMP6-204ENST00000572778 BUB1O43683 1085 aa21.09■□□□□ 0.97
CHMP6-204ENST00000572778 KDELR3O43731 214 aa21.09■□□□□ 0.97
CHMP6-204ENST00000572778 TMEM253P0C7T8 217 aa21.09■□□□□ 0.97
CHMP6-204ENST00000572778 CHRNA3P32297 505 aa21.09■□□□□ 0.97
CHMP6-204ENST00000572778 HOXD12P35452 270 aa21.09■□□□□ 0.97
CHMP6-204ENST00000572778 METAP1P53582 386 aa21.09■□□□□ 0.97
CHMP6-204ENST00000572778 GEMIN4P57678 1058 aaKnown RBP21.09■□□□□ 0.97
CHMP6-204ENST00000572778 DUOXA1Q1HG43 343 aa21.09■□□□□ 0.97
CHMP6-204ENST00000572778 PARP15Q460N3 678 aa21.09■□□□□ 0.97
CHMP6-204ENST00000572778 PEAR1Q5VY43 1037 aaPredicted RBP21.09■□□□□ 0.97
CHMP6-204ENST00000572778 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.09■□□□□ 0.97
CHMP6-204ENST00000572778 RFX8Q6ZV50 586 aa21.09■□□□□ 0.97
CHMP6-204ENST00000572778 UMODL1-AS1Q8N2C9 162 aa21.09■□□□□ 0.97
CHMP6-204ENST00000572778 TC2NQ8N9U0 490 aa21.09■□□□□ 0.97
CHMP6-204ENST00000572778 CHST14Q8NCH0 376 aa21.09■□□□□ 0.97
CHMP6-204ENST00000572778 CEP76Q8TAP6 659 aa21.09■□□□□ 0.97
CHMP6-204ENST00000572778 NETO1Q8TDF5 533 aa21.09■□□□□ 0.97
CHMP6-204ENST00000572778 CEP44Q9C0F1 390 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms