RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 NEK5Q6P3R8 708 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 UNQ6494/PRO21346Q6UXR6 183 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 IQCHQ86VS3 1027 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 OR2A12Q8NGT7 310 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SLC30A5Q8TAD4 765 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 RXFP2Q8WXD0 754 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 CAMK1GQ96NX5 476 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 CDC6Q99741 560 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 C11orf70Q9BRQ4 267 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 PREBQ9HCU5 417 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 ADAM22Q9P0K1 906 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TMEM63CQ9P1W3 806 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 ARHGAP20Q9P2F6 1191 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 OR12D3Q9UGF7 316 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 NEU3Q9UQ49 428 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 DMTF1Q9Y222 760 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 FARP1Q9Y4F1 1045 aaPredicted RBP17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SNX10Q9Y5X0 201 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 PLXNB3Q9ULL4 1909 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 WDFY3Q8IZQ1 3526 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 FAM47DPA6NHR8 397 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SIGLEC16A6NMB1 481 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 YKT6O15498 198 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 ZNF821O75541 412 aaPredicted RBP17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 CCDC172P0C7W6 258 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 FTH1P19P0C7X4 201 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 KRT3P12035 628 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 CD38P28907 300 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 MAPKAPK2P49137 400 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 METAP1P53582 386 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 ATP11AP98196 1134 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 CCDC15Q0P6D6 951 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 CNTN1Q12860 1018 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 OVGP1Q12889 678 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 KCNT1Q5JUK3 1230 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 NAPEPLDQ6IQ20 393 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 RETSATQ6NUM9 610 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 PPP1R2P3Q6NXS1 205 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TFAP2DQ7Z6R9 452 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 ADAT2Q7Z6V5 191 aaKnown RBP17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 NLRP14Q86W24 1093 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 PLPP6Q8IY26 295 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 ATP11CQ8NB49 1132 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 JOSD2Q8TAC2 188 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SLC6A18Q96N87 628 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SYT11Q9BT88 431 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 ERVMER34-1Q9H9K5 563 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TMEM248Q9NWD8 314 aa17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 APOBEC2Q9Y235 224 aaKnown RBP17.48■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TRPM6Q9BX84 2022 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 A0A1B0GTQ1 180 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 H0Y8X5 98 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 RNGTTO60942 597 aaKnown RBP17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SRGAP2O75044 1071 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TOP3BO95985 862 aaKnown RBP17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 PRNPP04156 253 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 WNT1P04628 370 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 CTSLP07711 333 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 FERP16591 822 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 RHOQP17081 205 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 CHRNA3P32297 505 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 RFC1P35251 1148 aaPredicted RBP17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 GRK6P43250 576 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SERPINH1P50454 418 aaKnown RBP17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 HDAC4P56524 1084 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 C21orf59P57076 290 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 PPP2CBP62714 309 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 PPP2CAP67775 309 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 GNA12Q03113 381 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 C15orf59Q2T9L4 293 aaPredicted RBP17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SLC45A4Q5BKX6 768 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 PPP1R15BQ5SWA1 713 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 PIP5KL1Q5T9C9 394 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 C22orf39Q6P5X5 142 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 AOPEPQ8N6M6 819 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 PCDH20Q8N6Y1 951 aaKnown RBP17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 MFSD2AQ8NA29 543 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 ISG20Q96AZ6 181 aaKnown RBP17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 AGPAT1Q99943 283 aa17.47■□□□□ 0.39
MAP1LC3B-208ENST00000570189 ARID1BQ8NFD5 2236 aaPredicted RBP17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TBC1D3DA0A087WVF3 549 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TBC1D3IA0A087WXS9 549 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TBC1D3EA0A087X179 549 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TBC1D3KA0A087X1G2 549 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TBC1D3FA6NER0 549 aaPredicted RBP17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TBC1D3LB9A6J9 549 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SMAD6O43541 496 aaKnown RBP17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 HYAL3O43820 417 aaPredicted RBP17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 RTN2O75298 545 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TBC1D3HP0C7X1 549 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 ATP1A3P13637 1013 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 RRM1P23921 792 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 NUMBP49757 651 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 AIF1P55008 147 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TAS2R38P59533 333 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 INAVAQ3KP66 663 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 RAB6CQ53S08 254 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TBC1D3GQ6DHY5 549 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TBC1D3CQ6IPX1 549 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms