RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 RGS2P41220 211 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 TUBP50607 506 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 ZNF131P52739 623 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 NCKAP1LP55160 1127 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 C1QTNF8P60827 252 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 SCAPQ12770 1279 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 GIT2Q14161 759 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 CTTNQ14247 550 aaKnown RBP7.53□□□□□ -1.2
CNOT1-222ENST00000570139 XKR3Q5GH77 459 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 CRB2Q5IJ48 1285 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 MAP3K21Q5TCX8 1036 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 AGAP9Q5VTM2 703 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 RAP1GAP2Q684P5 730 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 RINT1Q6NUQ1 792 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 C16orf54Q6UWD8 224 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 NEK10Q6ZWH5 1172 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 ARMCX2Q7L311 632 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 NRSN1Q8IZ57 195 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 MYOCDQ8IZQ8 938 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 ANKRD53Q8N9V6 530 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 MCPH1Q8NEM0 835 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 FNIP1Q8TF40 1166 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 LRRC15Q8TF66 581 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 SEPT1Q8WYJ6 367 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 RFFLQ8WZ73 363 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 TRIM44Q96DX7 344 aaPredicted RBP7.53□□□□□ -1.2
CNOT1-222ENST00000570139 COG8Q96MW5 612 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 JPH2Q9BR39 696 aaPredicted RBP7.53□□□□□ -1.2
CNOT1-222ENST00000570139 NUDT16L1Q9BRJ7 211 aaKnown RBP7.53□□□□□ -1.2
CNOT1-222ENST00000570139 TRIM5Q9C035 493 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 ABHD16BQ9H3Z7 469 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 THAP9Q9H5L6 903 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 AZI2Q9H6S1 392 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 PARVGQ9HBI0 331 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 PREBQ9HCU5 417 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 FAM30AQ9NZY2 134 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 NCDNQ9UBB6 729 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 NFE2L3Q9Y4A8 694 aa7.53□□□□□ -1.2
CNOT1-222ENST00000570139 IGKV6D-21A0A0A0MT36 114 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 FARP2O94887 1054 aaPredicted RBP7.52□□□□□ -1.21
CNOT1-222ENST00000570139 ADCY5O95622 1261 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 GGPS1O95749 300 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 SERPINC1P01008 464 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 POMCP01189 267 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 PRKCBP05771 671 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 PGK2P07205 417 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 PECAM1P16284 738 aaPredicted RBP7.52□□□□□ -1.21
CNOT1-222ENST00000570139 ZNF18P17022 549 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 MST1P26927 711 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 CASP1P29466 404 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 ATICP31939 592 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 PRCPP42785 496 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 RARRES1P49788 294 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 PNLIPRP1P54315 467 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 PRKAA2P54646 552 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 BCAT1P54687 386 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 NR1H2P55055 460 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 NPEPPSP55786 919 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 CLRN1P58418 232 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 SNRPFP62306 86 aaKnown RBP7.52□□□□□ -1.21
CNOT1-222ENST00000570139 USP10Q14694 798 aaKnown RBP7.52□□□□□ -1.21
CNOT1-222ENST00000570139 BMT2Q1RMZ1 405 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 DEFB115Q30KQ5 88 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 EDRF1Q3B7T1 1238 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 FILIP1LQ4L180 1135 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 FAM133BQ5BKY9 247 aaKnown RBP7.52□□□□□ -1.21
CNOT1-222ENST00000570139 HERC4Q5GLZ8 1057 aaPredicted RBP7.52□□□□□ -1.21
CNOT1-222ENST00000570139 CELF3Q5SZQ8 465 aaKnown RBP7.52□□□□□ -1.21
CNOT1-222ENST00000570139 UTP14CQ5TAP6 766 aaKnown RBP7.52□□□□□ -1.21
CNOT1-222ENST00000570139 ICE2Q659A1 982 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 ISM2Q6H9L7 571 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 CENPPQ6IPU0 288 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 ZDHHC24Q6UX98 284 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 SEPT14Q6ZU15 432 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 C1orf186Q6ZWK4 172 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 USP30Q70CQ3 517 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 PLPPR4Q7Z2D5 763 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 FAM46DQ8NEK8 389 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 NUDT10Q8NFP7 164 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 GOLGA5Q8TBA6 731 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 NELFBQ8WX92 580 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 KIFAP3Q92845 792 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 P2RX5Q93086 422 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 HVCN1Q96D96 273 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 NUDT11Q96G61 164 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 C7orf26Q96N11 449 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 TRAPPC9Q96Q05 1148 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 REEP2Q9BRK0 252 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 CHCHD6Q9BRQ6 235 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 TWSG1Q9GZX9 223 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 ST6GALNAC4Q9H4F1 302 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 NOD2Q9HC29 1040 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 ZNF302Q9NR11 478 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 NRBP2Q9NSY0 501 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 TMEM160Q9NX00 188 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 CGNQ9P2M7 1197 aaKnown RBP7.52□□□□□ -1.21
CNOT1-222ENST00000570139 AASSQ9UDR5 926 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 GDAQ9Y2T3 454 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 CEP350Q5VT06 3117 aa7.52□□□□□ -1.21
CNOT1-222ENST00000570139 TNPO2O14787 897 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms