RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 HOXD9P28356 352 aaPredicted RBP11.15□□□□□ -0.63
PDXDC1-216ENST00000569715 CDC25CP30307 473 aa11.15□□□□□ -0.63
PDXDC1-216ENST00000569715 ETFBP38117 255 aa11.15□□□□□ -0.63
PDXDC1-216ENST00000569715 CDH4P55283 916 aa11.15□□□□□ -0.63
PDXDC1-216ENST00000569715 ERVK-21P61565 698 aa11.15□□□□□ -0.63
PDXDC1-216ENST00000569715 PARP15Q460N3 678 aa11.15□□□□□ -0.63
PDXDC1-216ENST00000569715 TTC19Q6DKK2 380 aaPredicted RBP11.15□□□□□ -0.63
PDXDC1-216ENST00000569715 RIN3Q8TB24 985 aa11.15□□□□□ -0.63
PDXDC1-216ENST00000569715 ARNTL2Q8WYA1 636 aa11.15□□□□□ -0.63
PDXDC1-216ENST00000569715 ABHD8Q96I13 439 aa11.15□□□□□ -0.63
PDXDC1-216ENST00000569715 NT5MQ9NPB1 228 aa11.15□□□□□ -0.63
PDXDC1-216ENST00000569715 STOML2Q9UJZ1 356 aa11.15□□□□□ -0.63
PDXDC1-216ENST00000569715 SUN1O94901 812 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 C1QAP02745 245 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 CREB1P16220 341 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 IHHQ14623 411 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 LRRC49Q8IUZ0 686 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 EBNA1BP2Q99848 306 aaKnown RBP11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 PBX4Q9BYU1 374 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 HCFC2Q9Y5Z7 792 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 PHBP35232 272 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 SLC7A9P82251 487 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 GNA12Q03113 381 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 TMED2Q15363 201 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 TEAD2Q15562 447 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 SMAD1Q15797 465 aaKnown RBP11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 TRMT10BQ6PF06 316 aaKnown RBP11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 POTEHQ6S545 545 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 UNC5BQ8IZJ1 945 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 PGBD5Q8N414 524 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 GCNAQ96QF7 691 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 PCDHA11Q9Y5I1 949 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 MYOFQ9NZM1 2061 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 TRAV19A0A0A6YYK7 116 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 IVLP07476 585 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 RHOP08100 348 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 MLNP12872 115 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 SARNPP82979 210 aaKnown RBP11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 KBTBD12Q3ZCT8 623 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 CXorf57Q6NSI4 855 aaKnown RBP11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 CASC4Q6P4E1 433 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 KDM7AQ6ZMT4 941 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 BBS7Q8IWZ6 715 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 WFDC5Q8TCV5 224 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 FCRL5Q96RD9 977 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 CCDC77Q9BR77 488 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 PDFQ9HBH1 243 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 DONSONQ9NYP3 566 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 LGALS13Q9UHV8 139 aa11.14□□□□□ -0.63
PDXDC1-216ENST00000569715 A0A1B0GVM2 712 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 TCAF2A6NFQ2 919 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 EPOPA6NHQ4 379 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 CCDC85CA6NKD9 419 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 GFRA2O00451 464 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 MUSKO15146 869 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 PRAMEF11O60813 436 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 TBL1XO60907 577 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 CDH16O75309 829 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 CLDN11O75508 207 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 AGTP01019 485 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 EPHA5P54756 1037 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 YBEYP58557 167 aaPredicted RBP11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 ANO4Q32M45 955 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 FSCBQ5H9T9 825 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 GPR158Q5T848 1215 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 KLHDC8BQ8IXV7 354 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 IPMKQ8NFU5 416 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 GDPD5Q8WTR4 605 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 LRRC39Q96DD0 335 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 STAMBPL1Q96FJ0 436 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 PAFAH2Q99487 392 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 NKX2-4Q9H2Z4 354 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 CASS4Q9NQ75 786 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 SMYD2Q9NRG4 433 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 TNRC18O15417 2968 aaPredicted RBP11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 CXorf49A8MYA2 514 aaPredicted RBP11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 NEBLO76041 1014 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 TPH1P17752 444 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 DSC2Q02487 901 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 IL10RBQ08334 325 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 NIPAL4Q0D2K0 466 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 HNRNPDQ14103 355 aaKnown RBP11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 CERCAMQ5T4B2 595 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 COL13A1Q5TAT6 717 aaPredicted RBP11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 MARC1Q5VT66 337 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 CES3Q6UWW8 571 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 KDELC2Q7Z4H8 507 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 EXOC3L1Q86VI1 746 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 SPON2Q9BUD6 331 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 SDR42E2A6NKP2 422 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 LEFTY2O00292 366 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 PMPCBO75439 489 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 RHOCP08134 193 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 MMP13P45452 471 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 TERF2Q15554 542 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 IL31Q6EBC2 164 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 CHST9Q7L1S5 443 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 GRASPQ7Z6J2 395 aaPredicted RBP11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 CROCCP2Q86T23 111 aa11.13□□□□□ -0.63
PDXDC1-216ENST00000569715 DNAAF3Q8N9W5 541 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms