RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 MTM1Q13496 603 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 HNRNPDQ14103 355 aaKnown RBP5.49□□□□□ -1.53
SF3B3-213ENST00000569687 BTG3Q14201 252 aaPredicted RBP5.49□□□□□ -1.53
SF3B3-213ENST00000569687 CRYMQ14894 314 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 SETDB1Q15047 1291 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 AGERQ15109 404 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 TRIP4Q15650 581 aaPredicted RBP5.49□□□□□ -1.53
SF3B3-213ENST00000569687 SPRED3Q2MJR0 410 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 TTC31Q49AM3 519 aaPredicted RBP5.49□□□□□ -1.53
SF3B3-213ENST00000569687 C5orf22Q49AR2 442 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 PAN2Q504Q3 1202 aaKnown RBP5.49□□□□□ -1.53
SF3B3-213ENST00000569687 SLC39A12Q504Y0 691 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 C4orf48Q5BLP8 95 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 FAM182AQ5T1J6 154 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 SYCP2LQ5T4T6 812 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 TEDDM1Q5T9Z0 273 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 FAM91A1Q658Y4 838 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 ATG16L1Q676U5 607 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 TIGD7Q6NT04 549 aaPredicted RBP5.49□□□□□ -1.53
SF3B3-213ENST00000569687 RANBP10Q6VN20 620 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 PACS1Q6VY07 963 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 CDHR3Q6ZTQ4 885 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 ASRGL1Q7L266 308 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 CTU1Q7Z7A3 348 aaKnown RBP5.49□□□□□ -1.53
SF3B3-213ENST00000569687 FAM126BQ8IXS8 530 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 ZNF687Q8N1G0 1237 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 CCDC33Q8N5R6 958 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 TEX26Q8N6G2 289 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 RTL3Q8N8U3 475 aaKnown RBP5.49□□□□□ -1.53
SF3B3-213ENST00000569687 SPPL2BQ8TCT7 592 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 C10orf82Q8WW14 230 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 SEPT8Q92599 483 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 CASP10Q92851 521 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 RNF34Q969K3 372 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 COL26A1Q96A83 441 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 TBC1D31Q96DN5 1066 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 C7orf26Q96N11 449 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 FCRL3Q96P31 734 aaPredicted RBP5.49□□□□□ -1.53
SF3B3-213ENST00000569687 TMEM237Q96Q45 408 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 RBCK1Q9BYM8 510 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 TRIM55Q9BYV6 548 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 SLC39A8Q9C0K1 460 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 IL22Q9GZX6 179 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 UGT1A7Q9HAW7 530 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 UGT1A10Q9HAW8 530 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 UGT1A8Q9HAW9 530 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 ARNT2Q9HBZ2 717 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 MRM3Q9HC36 420 aaKnown RBP5.49□□□□□ -1.53
SF3B3-213ENST00000569687 GLOD4Q9HC38 313 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 SLC40A1Q9NP59 571 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 SLCO1B3Q9NPD5 702 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 ARHGEF3Q9NR81 526 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 OLA1Q9NTK5 396 aaKnown RBP5.49□□□□□ -1.53
SF3B3-213ENST00000569687 ABCF3Q9NUQ8 709 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 ZNF358Q9NW07 568 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 OSER1Q9NX31 292 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 SYBUQ9NX95 663 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 SEPT10Q9P0V9 454 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 VANGL2Q9ULK5 521 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 SOX13Q9UN79 622 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 SNX10Q9Y5X0 201 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 NR2E3Q9Y5X4 410 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 HS3ST4Q9Y661 456 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 RPS6KL1Q9Y6S9 549 aa5.49□□□□□ -1.53
SF3B3-213ENST00000569687 WDR91A4D1P6 747 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 ARHGAP42A6NI28 874 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 GOLGA8CPA6NN73 597 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 E9PAM4 449 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 H0YHG0 523 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 GOLGA8RI6L899 631 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 HNRNPCL1O60812 293 aaKnown RBP5.48□□□□□ -1.53
SF3B3-213ENST00000569687 SIN3BO75182 1162 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 SNNO75324 88 aaPredicted RBP5.48□□□□□ -1.53
SF3B3-213ENST00000569687 PEX11BO96011 259 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 IGLV3-27P01718 113 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 MPOP05164 745 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 GALTP07902 379 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 ITGA2BP08514 1039 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 DLDP09622 509 aaKnown RBP5.48□□□□□ -1.53
SF3B3-213ENST00000569687 SRGAP2BP0DMP2 458 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 T-ENOLP0DO92 83 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 HSPA8P11142 646 aaKnown RBP5.48□□□□□ -1.53
SF3B3-213ENST00000569687 CCL5P13501 91 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 NQO1P15559 274 aaKnown RBP5.48□□□□□ -1.53
SF3B3-213ENST00000569687 NFKB1P19838 968 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 BGNP21810 368 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 YWHAQP27348 245 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 SPRP35270 261 aaPredicted RBP5.48□□□□□ -1.53
SF3B3-213ENST00000569687 GP5P40197 560 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 CSRP3P50461 194 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 RENBPP51606 427 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 GEMP55040 296 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 CSE1LP55060 971 aaKnown RBP5.48□□□□□ -1.53
SF3B3-213ENST00000569687 TBX4P57082 545 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 YBEYP58557 167 aaPredicted RBP5.48□□□□□ -1.53
SF3B3-213ENST00000569687 NCALDP61601 193 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 RPL10AP62906 217 aaKnown RBP5.48□□□□□ -1.53
SF3B3-213ENST00000569687 CDH17Q12864 832 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 ILF2Q12905 390 aaKnown RBP5.48□□□□□ -1.53
SF3B3-213ENST00000569687 ZBTB17Q13105 803 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms