RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 E9PAM4 449 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 BNIP3LO60238 219 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 ZMPSTE24O75844 475 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 CD160O95971 181 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 TBC1D3HP0C7X1 549 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 JAM2P57087 298 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 BPIFB4P59827 614 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 FMO1Q01740 532 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 BNIP3Q12983 259 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 CAMK2BQ13554 666 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 KRT31Q15323 416 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 ACCSLQ4AC99 568 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 TBC1D3GQ6DHY5 549 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 TBC1D3CQ6IPX1 549 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 ERICH1Q86X53 443 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 FAM131BQ86XD5 332 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 TBC1D3Q8IZP1 549 aaPredicted RBP14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 JOSD2Q8TAC2 188 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 OR8D1Q8WZ84 308 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 PCDHB18PQ96TA0 734 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 STK33Q9BYT3 514 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 MUC3BQ9H195 1237 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 RRN3Q9NYV6 651 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 SLC25A13Q9UJS0 675 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 ATRXP46100 2492 aa14.19□□□□□ -0.14
GTF3C1-211ENST00000569653 TLR4O00206 839 aa14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 ALOX15BO15296 676 aa14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 TNFSF14O43557 240 aa14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 GFPT2O94808 682 aa14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 CYP1A1P04798 512 aaPredicted RBP14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 RHOCP08134 193 aa14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 EEF1GP26641 437 aaKnown RBP14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 EPHA8P29322 1005 aaPredicted RBP14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 C21orf59P57076 290 aa14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 PTP4A2Q12974 167 aa14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 DNAJC3Q13217 504 aa14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 C15orf59Q2T9L4 293 aaPredicted RBP14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 NAPEPLDQ6IQ20 393 aa14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 DHRS13Q6UX07 377 aa14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 RBM43Q6ZSC3 357 aaKnown RBP14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 TRIM69Q86WT6 500 aa14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 DCAF4L2Q8NA75 395 aa14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 VPS16Q9H269 839 aa14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 TNKS2Q9H2K2 1166 aa14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 METTL5Q9NRN9 209 aaKnown RBP14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 NDFIP2Q9NV92 336 aa14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 STAP1Q9ULZ2 295 aa14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 SIK3Q9Y2K2 1263 aa14.18□□□□□ -0.14
GTF3C1-211ENST00000569653 FAM72CH0Y354 149 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 PES1O00541 588 aaKnown RBP14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 SLC7A4O43246 635 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 ENDOD1O94919 500 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 LSM8O95777 96 aaKnown RBP14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 PRLRP16471 622 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 ZNF18P17022 549 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 RDXP35241 583 aaKnown RBP14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 NNMTP40261 264 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 OXCT1P55809 520 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 ARF5P84085 180 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 SUZ12Q15022 739 aaKnown RBP14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 CCDC157Q569K6 752 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 CCDC183Q5T5S1 534 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 FAM72AQ5TYM5 149 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 MANEALQ5VSG8 457 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 SFMBT2Q5VUG0 894 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 FAM72DQ6L9T8 149 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 C22orf39Q6P5X5 142 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 FAM72BQ86X60 149 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 TMEM145Q8NBT3 493 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 SLC30A5Q8TAD4 765 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 ENOX1Q8TC92 643 aaKnown RBP14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 KLK6Q92876 244 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 C1orf74Q96LT6 269 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 MYOCQ99972 504 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 HSD3B7Q9H2F3 369 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 PDCL3Q9H2J4 239 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 FAM207AQ9NSI2 230 aaPredicted RBP14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 WASF2Q9Y6W5 498 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 LRRK1Q38SD2 2015 aa14.17□□□□□ -0.14
GTF3C1-211ENST00000569653 COL27A1Q8IZC6 1860 aaPredicted RBP14.16□□□□□ -0.14
GTF3C1-211ENST00000569653 RNGTTO60942 597 aaKnown RBP14.16□□□□□ -0.14
GTF3C1-211ENST00000569653 SRGAP2O75044 1071 aa14.16□□□□□ -0.14
GTF3C1-211ENST00000569653 MMP8P22894 467 aa14.16□□□□□ -0.14
GTF3C1-211ENST00000569653 CHRNA3P32297 505 aa14.16□□□□□ -0.14
GTF3C1-211ENST00000569653 ACVRL1P37023 503 aa14.16□□□□□ -0.14
GTF3C1-211ENST00000569653 SNX16P57768 344 aa14.16□□□□□ -0.14
GTF3C1-211ENST00000569653 POLR2FP61218 127 aaKnown RBP14.16□□□□□ -0.14
GTF3C1-211ENST00000569653 ATP11AP98196 1134 aa14.16□□□□□ -0.14
GTF3C1-211ENST00000569653 CDR2Q01850 454 aa14.16□□□□□ -0.14
GTF3C1-211ENST00000569653 SFSWAPQ12872 951 aaKnown RBP14.16□□□□□ -0.14
GTF3C1-211ENST00000569653 SMAD1Q15797 465 aaKnown RBP14.16□□□□□ -0.14
GTF3C1-211ENST00000569653 ZNF284Q2VY69 593 aa14.16□□□□□ -0.14
GTF3C1-211ENST00000569653 CCDC14Q49A88 953 aa14.16□□□□□ -0.14
GTF3C1-211ENST00000569653 SASS6Q6UVJ0 657 aa14.16□□□□□ -0.14
GTF3C1-211ENST00000569653 DPY19L3Q6ZPD9 716 aa14.16□□□□□ -0.14
GTF3C1-211ENST00000569653 APTXQ7Z2E3 356 aaKnown RBP14.16□□□□□ -0.14
GTF3C1-211ENST00000569653 SETD3Q86TU7 594 aaPredicted RBP14.16□□□□□ -0.14
GTF3C1-211ENST00000569653 EID2Q8N6I1 236 aa14.16□□□□□ -0.14
GTF3C1-211ENST00000569653 MFSD2AQ8NA29 543 aa14.16□□□□□ -0.14
GTF3C1-211ENST00000569653 ATP11CQ8NB49 1132 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms