RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 DCLRE1BQ9H816 532 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 CNGB3Q9NQW8 809 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 COPG2Q9UBF2 871 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 PADI3Q9ULW8 664 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 TRPV2Q9Y5S1 764 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 TTC24A2A3L6 582 aaPredicted RBP8.92□□□□□ -0.98
LINC00558-201ENST00000569422 SNNO75324 88 aaPredicted RBP8.92□□□□□ -0.98
LINC00558-201ENST00000569422 TBX10O75333 385 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 PDE5AO76074 875 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 RGS2P41220 211 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 ITKQ08881 620 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 MPP3Q13368 585 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 NOMO2Q5JPE7 1267 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 C1orf146Q5VVC0 180 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 SNX30Q5VWJ9 437 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 STEAP4Q687X5 459 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 TAF2Q6P1X5 1199 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 TRPV1Q8NER1 839 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 GABPB2Q8TAK5 448 aaPredicted RBP8.92□□□□□ -0.98
LINC00558-201ENST00000569422 DQX1Q8TE96 717 aaKnown RBP8.92□□□□□ -0.98
LINC00558-201ENST00000569422 FRS2Q8WU20 508 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 ADAM2Q99965 735 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 IGSF9Q9P2J2 1179 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 TAGLN3Q9UI15 199 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 TK2O00142 265 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 DCXO43602 365 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 TOMM70O94826 608 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 FBXO21O94952 628 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 VAPBO95292 243 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 PROCP04070 461 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 C2P06681 752 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 AKR1A1P14550 325 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 GNAZP19086 355 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 CNTFP26441 200 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 PCSK1P29120 753 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 ARPP19P56211 112 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 SPANXN3Q5MJ09 141 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 BTBD8Q5XKL5 378 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 IL31Q6EBC2 164 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 NAPRTQ6XQN6 538 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 TFAP2DQ7Z6R9 452 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 METTL23Q86XA0 190 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 RNF135Q8IUD6 432 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 DENND6AQ8IWF6 608 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 SCUBE1Q8IWY4 988 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 CNTD1Q8N815 330 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 ZNF781Q8N8C0 355 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 OR10T2Q8NGX3 314 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 OMDQ99983 421 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 FTHL17Q9BXU8 183 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 ABI2Q9NYB9 513 aaPredicted RBP8.91□□□□□ -0.98
LINC00558-201ENST00000569422 CDH9Q9ULB4 789 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 PLXNB2O15031 1838 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 HTTP42858 3142 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 ZCWPW2A0A1B0GU75 182 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 BIRC5O15392 142 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 USP1O94782 785 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 SERPINE1P05121 402 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 PRKCGP05129 697 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 MX2P20592 715 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 CHRNA4P43681 627 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 PPIDQ08752 370 aaKnown RBP8.91□□□□□ -0.98
LINC00558-201ENST00000569422 NSUN2Q08J23 767 aaKnown RBP eCLIP8.91□□□□□ -0.98
LINC00558-201ENST00000569422 USP10Q14694 798 aaKnown RBP8.91□□□□□ -0.98
LINC00558-201ENST00000569422 GRM3Q14832 879 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 UPP1Q16831 310 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 GRTP1Q5TC63 336 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 OVOS1Q6IE37 1185 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 MAVSQ7Z434 540 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 LIMS2Q7Z4I7 341 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 TMPRSS6Q8IU80 811 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 URGCPQ8TCY9 931 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 RBBP8Q99708 897 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 CPNE1Q99829 537 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 RTP3Q9BQQ7 232 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 CASS4Q9NQ75 786 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 GTF2IRD1Q9UHL9 959 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 TLK1Q9UKI8 766 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 PRG3Q9Y2Y8 225 aaPredicted RBP8.91□□□□□ -0.98
LINC00558-201ENST00000569422 LAMA3Q16787 3333 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 PLXNA1Q9UIW2 1896 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 HHLA1C9JL84 531 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 HNRNPCL1O60812 293 aaKnown RBP8.91□□□□□ -0.98
LINC00558-201ENST00000569422 CIB2O75838 187 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 WFS1O76024 890 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 PSMG1O95456 288 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 CHRNGP07510 517 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 HMBSP08397 361 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 ODC1P11926 461 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 CD1EP15812 388 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 CTGFP29279 349 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 SERPINB6P35237 376 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 ABCE1P61221 599 aaKnown RBP8.91□□□□□ -0.98
LINC00558-201ENST00000569422 MAXP61244 160 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 MPP1Q00013 466 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 PRPSAP1Q14558 356 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 KRT72Q14CN4 511 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 C10orf62Q5T681 223 aaPredicted RBP8.91□□□□□ -0.98
LINC00558-201ENST00000569422 NXNQ6DKJ4 435 aa8.91□□□□□ -0.98
LINC00558-201ENST00000569422 ALKBH2Q6NS38 261 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms