RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 LRRD1A4D1F6 860 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 ARHGAP42A6NI28 874 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 WASH4PA8MWX3 477 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 PROB1E7EW31 1015 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 KDELR3O43731 214 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 NRDCO43847 1150 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 ATP9BO43861 1147 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 MTA2O94776 668 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 KRT1P04264 644 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 CD48P09326 243 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 SERPINH1P50454 418 aaKnown RBP13.08□□□□□ -0.32
CDT1-203ENST00000569140 CLCN6P51797 869 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 GEMIN4P57678 1058 aaKnown RBP13.08□□□□□ -0.32
CDT1-203ENST00000569140 RPS14P62263 151 aaKnown RBP13.08□□□□□ -0.32
CDT1-203ENST00000569140 MMRN1Q13201 1228 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 DPYSQ14117 519 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 ELAVL3Q14576 367 aaKnown RBP13.08□□□□□ -0.32
CDT1-203ENST00000569140 CST6Q15828 149 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 MAP7D1Q3KQU3 841 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 PLK5Q496M5 336 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 LAIR1Q6GTX8 287 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 SLC36A4Q6YBV0 504 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 POLNQ7Z5Q5 900 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 DSG4Q86SJ6 1040 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 MAP7D3Q8IWC1 876 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 TXLNBQ8N3L3 684 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 SUMF1Q8NBK3 374 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 GRIN3AQ8TCU5 1115 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 PTPRN2Q92932 1015 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 CSPG4P5Q96PW8 444 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 OMDQ99983 421 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 ACE2Q9BYF1 805 aaPredicted RBP13.08□□□□□ -0.32
CDT1-203ENST00000569140 TM6SF2Q9BZW4 377 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 RSPH9Q9H1X1 276 aaPredicted RBP13.08□□□□□ -0.32
CDT1-203ENST00000569140 GOLPH3Q9H4A6 298 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 MBD1Q9UIS9 605 aaPredicted RBP13.08□□□□□ -0.32
CDT1-203ENST00000569140 NCKAP1Q9Y2A7 1128 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 MFHAS1Q9Y4C4 1052 aa13.08□□□□□ -0.32
CDT1-203ENST00000569140 IGHV1OR15-9A0A0B4J2B8 117 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 A0A1W2PP55 124 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 FAM47DPA6NHR8 397 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 C1QTNF3-AMACRE9PGA6 284 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 MID1O15344 667 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 SMAD6O43541 496 aaKnown RBP13.07□□□□□ -0.32
CDT1-203ENST00000569140 BUB1BO60566 1050 aaPredicted RBP13.07□□□□□ -0.32
CDT1-203ENST00000569140 RNASEH2AO75792 299 aaKnown RBP13.07□□□□□ -0.32
CDT1-203ENST00000569140 ZMPSTE24O75844 475 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 COMTP21964 271 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 CD6P30203 668 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 SLC1A1P43005 524 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 PAPOLAP51003 745 aaKnown RBP13.07□□□□□ -0.32
CDT1-203ENST00000569140 TPMTP51580 245 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 VAV2P52735 878 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 NDST2P52849 883 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 YBEYP58557 167 aaPredicted RBP13.07□□□□□ -0.32
CDT1-203ENST00000569140 CREB5Q02930 508 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 SERINC3Q13530 473 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 PDK2Q15119 407 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 DAAM2Q86T65 1068 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 TMEM139Q8IV31 216 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 UMODL1-AS1Q8N2C9 162 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 NPWQ8N729 165 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 FRS2Q8WU20 508 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 TOE1Q96GM8 510 aaKnown RBP13.07□□□□□ -0.32
CDT1-203ENST00000569140 GPR174Q9BXC1 333 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 SLC39A8Q9C0K1 460 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 KLC2Q9H0B6 622 aa13.07□□□□□ -0.32
CDT1-203ENST00000569140 DUSP15Q9H1R2 295 aaPredicted RBP13.07□□□□□ -0.32
CDT1-203ENST00000569140 PABPC3Q9H361 631 aaKnown RBP13.07□□□□□ -0.32
CDT1-203ENST00000569140 NOL6Q9H6R4 1146 aaKnown RBP13.07□□□□□ -0.32
CDT1-203ENST00000569140 UBA2Q9UBT2 640 aaPredicted RBP13.07□□□□□ -0.32
CDT1-203ENST00000569140 REXO2Q9Y3B8 237 aaKnown RBP13.07□□□□□ -0.32
CDT1-203ENST00000569140 MUC6Q6W4X9 2439 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 A0A0A6YYK5 440 aaPredicted RBP13.06□□□□□ -0.32
CDT1-203ENST00000569140 MACROD2A1Z1Q3 448 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 RCCD1A6NED2 376 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 ZSCAN5CA6NGD5 496 aaPredicted RBP13.06□□□□□ -0.32
CDT1-203ENST00000569140 MEI4A8MW99 385 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 ADH1BP00325 375 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 SLC8A1P32418 973 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 SERPINB6P35237 376 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 HCAR3P49019 387 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 RHOAP61586 193 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 SLC20A2Q08357 652 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 DPYSL3Q14195 570 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 CCDC6Q16204 474 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 FAM46CQ5VWP2 391 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 PMS2CLQ68D20 193 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 CYP2U1Q7Z449 544 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 RHOT1Q8IXI2 618 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 DCLK2Q8N568 766 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 ATPAF2Q8N5M1 289 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 PCDH20Q8N6Y1 951 aaKnown RBP13.06□□□□□ -0.32
CDT1-203ENST00000569140 OR6K2Q8NGY2 324 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.06□□□□□ -0.32
CDT1-203ENST00000569140 SNX19Q92543 992 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 RUBCNQ92622 972 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 MAK16Q9BXY0 300 aaKnown RBP13.06□□□□□ -0.32
CDT1-203ENST00000569140 ZDHHC6Q9H6R6 413 aa13.06□□□□□ -0.32
CDT1-203ENST00000569140 LRRC19Q9H756 370 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms