RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 HEY1Q9Y5J3 304 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 RAD54BQ9Y620 910 aa17.1■□□□□ 0.33
COMMD4-224ENST00000568877 J3KR12 359 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 PRAMEF11O60813 436 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 TJP3O95049 919 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 MAP3K6O95382 1288 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 CD160O95971 181 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 SRCP12931 536 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 MX2P20592 715 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 TGM2P21980 687 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 PRKCHP24723 683 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 AVPR2P30518 371 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 NR2C2P49116 596 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 IL10RBQ08334 325 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 SEL1L2Q5TEA6 688 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 NPNTQ6UXI9 565 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 MAMSTRQ6ZN01 415 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 SYT13Q7L8C5 426 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 SH2D3CQ8N5H7 860 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 ATPAF2Q8N5M1 289 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 ATP11CQ8NB49 1132 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 HERPUD2Q9BSE4 406 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 SP110Q9HB58 689 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 PDFQ9HBH1 243 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 ACTL7AQ9Y615 435 aa17.09■□□□□ 0.33
COMMD4-224ENST00000568877 TTC34A8MYJ7 566 aa17.08■□□□□ 0.32
COMMD4-224ENST00000568877 K7ERQ8 282 aa17.08■□□□□ 0.32
COMMD4-224ENST00000568877 ATP9BO43861 1147 aa17.08■□□□□ 0.32
COMMD4-224ENST00000568877 MAFKO60675 156 aa17.08■□□□□ 0.32
COMMD4-224ENST00000568877 ATP1A1P05023 1023 aaKnown RBP17.08■□□□□ 0.32
COMMD4-224ENST00000568877 EPHX1P07099 455 aa17.08■□□□□ 0.32
COMMD4-224ENST00000568877 HLA-EP13747 358 aa17.08■□□□□ 0.32
COMMD4-224ENST00000568877 HOXB2P14652 356 aa17.08■□□□□ 0.32
COMMD4-224ENST00000568877 GARSP41250 739 aaKnown RBP17.08■□□□□ 0.32
COMMD4-224ENST00000568877 SERPINH1P50454 418 aaKnown RBP17.08■□□□□ 0.32
COMMD4-224ENST00000568877 CLCN6P51797 869 aa17.08■□□□□ 0.32
COMMD4-224ENST00000568877 DLG2Q15700 870 aa17.08■□□□□ 0.32
COMMD4-224ENST00000568877 ACCSLQ4AC99 568 aa17.08■□□□□ 0.32
COMMD4-224ENST00000568877 LEKR1Q6ZMV7 388 aa17.08■□□□□ 0.32
COMMD4-224ENST00000568877 BZW1Q7L1Q6 419 aaKnown RBP17.08■□□□□ 0.32
COMMD4-224ENST00000568877 P3H4Q92791 437 aa17.08■□□□□ 0.32
COMMD4-224ENST00000568877 POLR3BQ9NW08 1133 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-224ENST00000568877 SPATA6Q9NWH7 488 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-224ENST00000568877 C2orf42Q9NWW7 574 aa17.08■□□□□ 0.32
COMMD4-224ENST00000568877 SAE1Q9UBE0 346 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-224ENST00000568877 SUN2Q9UH99 717 aa17.08■□□□□ 0.32
COMMD4-224ENST00000568877 SLC8A2Q9UPR5 921 aa17.08■□□□□ 0.32
COMMD4-224ENST00000568877 SMAD6O43541 496 aaKnown RBP17.07■□□□□ 0.32
COMMD4-224ENST00000568877 SYNCRIPO60506 623 aaKnown RBP17.07■□□□□ 0.32
COMMD4-224ENST00000568877 PECAM1P16284 738 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-224ENST00000568877 CXCR5P32302 372 aa17.07■□□□□ 0.32
COMMD4-224ENST00000568877 CXCL12P48061 93 aa17.07■□□□□ 0.32
COMMD4-224ENST00000568877 PDK1Q15118 436 aa17.07■□□□□ 0.32
COMMD4-224ENST00000568877 CRY1Q16526 586 aa17.07■□□□□ 0.32
COMMD4-224ENST00000568877 HNRNPA1L2Q32P51 320 aaKnown RBP17.07■□□□□ 0.32
COMMD4-224ENST00000568877 INO80DQ53TQ3 878 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-224ENST00000568877 CCDC181Q5TID7 509 aa17.07■□□□□ 0.32
COMMD4-224ENST00000568877 TMEM92Q6UXU6 159 aa17.07■□□□□ 0.32
COMMD4-224ENST00000568877 METTL3Q86U44 580 aaKnown RBP17.07■□□□□ 0.32
COMMD4-224ENST00000568877 ZNF366Q8N895 744 aa17.07■□□□□ 0.32
COMMD4-224ENST00000568877 DTWD2Q8NBA8 298 aa17.07■□□□□ 0.32
COMMD4-224ENST00000568877 FRS2Q8WU20 508 aa17.07■□□□□ 0.32
COMMD4-224ENST00000568877 CASKIN2Q8WXE0 1202 aa17.07■□□□□ 0.32
COMMD4-224ENST00000568877 ZNF599Q96NL3 588 aa17.07■□□□□ 0.32
COMMD4-224ENST00000568877 OLFM3Q96PB7 478 aa17.07■□□□□ 0.32
COMMD4-224ENST00000568877 TSGA13Q96PP4 275 aa17.07■□□□□ 0.32
COMMD4-224ENST00000568877 WDR24Q96S15 920 aa17.07■□□□□ 0.32
COMMD4-224ENST00000568877 CEP44Q9C0F1 390 aa17.07■□□□□ 0.32
COMMD4-224ENST00000568877 UBA2Q9UBT2 640 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-224ENST00000568877 CHD5Q8TDI0 1954 aa17.06■□□□□ 0.32
COMMD4-224ENST00000568877 EDDM13A0A1B0GTR0 161 aa17.06■□□□□ 0.32
COMMD4-224ENST00000568877 A0A1W2PQF6 199 aa17.06■□□□□ 0.32
COMMD4-224ENST00000568877 TARSL2A2RTX5 802 aaKnown RBP17.06■□□□□ 0.32
COMMD4-224ENST00000568877 APOC4-APOC2K7ER74 178 aa17.06■□□□□ 0.32
COMMD4-224ENST00000568877 APOC2P02655 101 aa17.06■□□□□ 0.32
COMMD4-224ENST00000568877 CCNCP24863 283 aa17.06■□□□□ 0.32
COMMD4-224ENST00000568877 CCR3P51677 355 aa17.06■□□□□ 0.32
COMMD4-224ENST00000568877 DGKEP52429 567 aa17.06■□□□□ 0.32
COMMD4-224ENST00000568877 SATB1Q01826 763 aa17.06■□□□□ 0.32
COMMD4-224ENST00000568877 KLF1Q13351 362 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-224ENST00000568877 STARD3Q14849 445 aa17.06■□□□□ 0.32
COMMD4-224ENST00000568877 SLC13A5Q86YT5 568 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-224ENST00000568877 CCNYQ8ND76 341 aa17.06■□□□□ 0.32
COMMD4-224ENST00000568877 HAUS1Q96CS2 278 aa17.06■□□□□ 0.32
COMMD4-224ENST00000568877 HDAC11Q96DB2 347 aa17.06■□□□□ 0.32
COMMD4-224ENST00000568877 PBKQ96KB5 322 aa17.06■□□□□ 0.32
COMMD4-224ENST00000568877 MTG2Q9H4K7 406 aa17.06■□□□□ 0.32
COMMD4-224ENST00000568877 FCF1Q9Y324 198 aaKnown RBP17.06■□□□□ 0.32
COMMD4-224ENST00000568877 MUC22E2RYF6 1773 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-224ENST00000568877 PPP1R12AO14974 1030 aaPredicted RBP17.05■□□□□ 0.32
COMMD4-224ENST00000568877 CEP104O60308 925 aa17.05■□□□□ 0.32
COMMD4-224ENST00000568877 TMCC1O94876 653 aa17.05■□□□□ 0.32
COMMD4-224ENST00000568877 PEX11BO96011 259 aa17.05■□□□□ 0.32
COMMD4-224ENST00000568877 VAV1P15498 845 aa17.05■□□□□ 0.32
COMMD4-224ENST00000568877 COL9A1P20849 921 aa17.05■□□□□ 0.32
COMMD4-224ENST00000568877 ZNF33AQ06730 810 aa17.05■□□□□ 0.32
COMMD4-224ENST00000568877 PPIDQ08752 370 aaKnown RBP17.05■□□□□ 0.32
COMMD4-224ENST00000568877 CAMK2GQ13555 558 aaPredicted RBP17.05■□□□□ 0.32
COMMD4-224ENST00000568877 RFTN1Q14699 578 aaPredicted RBP17.05■□□□□ 0.32
COMMD4-224ENST00000568877 CYTH1Q15438 398 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms