RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 AUHQ13825 339 aaKnown RBP15.24■□□□□ 0.03
USB1-214ENST00000568848 CCDC40Q4G0X9 1142 aa15.24■□□□□ 0.03
USB1-214ENST00000568848 ALFQ53S48 1182 aa15.24■□□□□ 0.03
USB1-214ENST00000568848 OTUD1Q5VV17 481 aaPredicted RBP15.24■□□□□ 0.03
USB1-214ENST00000568848 PTAR1Q7Z6K3 402 aaPredicted RBP15.24■□□□□ 0.03
USB1-214ENST00000568848 IQCHQ86VS3 1027 aa15.24■□□□□ 0.03
USB1-214ENST00000568848 SH2D3CQ8N5H7 860 aa15.24■□□□□ 0.03
USB1-214ENST00000568848 IFI44Q8TCB0 444 aa15.24■□□□□ 0.03
USB1-214ENST00000568848 MAPK15Q8TD08 544 aa15.24■□□□□ 0.03
USB1-214ENST00000568848 BTN2A3PQ96KV6 586 aa15.24■□□□□ 0.03
USB1-214ENST00000568848 SLC4A5Q9BY07 1137 aa15.24■□□□□ 0.03
USB1-214ENST00000568848 GTPBP4Q9BZE4 634 aaKnown RBP15.24■□□□□ 0.03
USB1-214ENST00000568848 IRX2Q9BZI1 471 aaPredicted RBP15.24■□□□□ 0.03
USB1-214ENST00000568848 KLHL11Q9NVR0 708 aa15.24■□□□□ 0.03
USB1-214ENST00000568848 SLC25A13Q9UJS0 675 aa15.24■□□□□ 0.03
USB1-214ENST00000568848 VPS28Q9UK41 221 aa15.24■□□□□ 0.03
USB1-214ENST00000568848 DMTF1Q9Y222 760 aa15.24■□□□□ 0.03
USB1-214ENST00000568848 HS3ST4Q9Y661 456 aa15.24■□□□□ 0.03
USB1-214ENST00000568848 TRPM6Q9BX84 2022 aa15.24■□□□□ 0.03
USB1-214ENST00000568848 SPTA1P02549 2419 aa15.24■□□□□ 0.03
USB1-214ENST00000568848 TCAF2A6NFQ2 919 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 C1QTNF3-AMACRE9PGA6 284 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 MCF2LO15068 1137 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 SLC7A4O43246 635 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 THAP12O43422 761 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 PCDH8O95206 1070 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 PLK1P53350 603 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 E2F1Q01094 437 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 NNTQ13423 1086 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 DEFB133Q30KQ1 61 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 PERM1Q5SV97 790 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 ZNF658Q5TYW1 1059 aaPredicted RBP15.23■□□□□ 0.03
USB1-214ENST00000568848 KLHL10Q6JEL2 608 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 Q6ZSR6 202 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 NYAP1Q6ZVC0 841 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 EFL1Q7Z2Z2 1120 aaKnown RBP15.23■□□□□ 0.03
USB1-214ENST00000568848 HORMAD1Q86X24 394 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 RBFAQ8N0V3 343 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 WDTC1Q8N5D0 677 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 ATP6V0D2Q8N8Y2 350 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 OR2A12Q8NGT7 310 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 RNF34Q969K3 372 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 BMFQ96LC9 184 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 CPXM1Q96SM3 734 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 SIK2Q9H0K1 926 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 POPDC2Q9HBU9 364 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 GGT7Q9UJ14 662 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 PNMA8BQ9ULN7 279 aaPredicted RBP15.23■□□□□ 0.03
USB1-214ENST00000568848 COL12A1Q99715 3063 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 BSNQ9UPA5 3926 aa15.23■□□□□ 0.03
USB1-214ENST00000568848 PTPN13Q12923 2485 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 A0A0D9SEW6 157 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 SPINT1O43278 529 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 PAGE1O75459 146 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 GKP32189 559 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 CHRNA3P32297 505 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 STX17P56962 302 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 YWHAZP63104 245 aaKnown RBP15.22■□□□□ 0.03
USB1-214ENST00000568848 PDCLQ13371 301 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 C1orf61Q13536 156 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 FZD2Q14332 565 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 ARSIQ5FYB1 569 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 FAM46CQ5VWP2 391 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 FAM183BPQ6ZVS7 135 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 TFAP2DQ7Z6R9 452 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 ATP11CQ8NB49 1132 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 LSM14AQ8ND56 463 aaKnown RBP15.22■□□□□ 0.03
USB1-214ENST00000568848 ZNF548Q8NEK5 533 aaPredicted RBP15.22■□□□□ 0.03
USB1-214ENST00000568848 PRR11Q96HE9 360 aaPredicted RBP15.22■□□□□ 0.03
USB1-214ENST00000568848 ZNF578Q96N58 590 aaPredicted RBP15.22■□□□□ 0.03
USB1-214ENST00000568848 DEPDC7Q96QD5 511 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 SCAND2PQ9GZW5 306 aaPredicted RBP15.22■□□□□ 0.03
USB1-214ENST00000568848 INTS2Q9H0H0 1204 aaKnown RBP15.22■□□□□ 0.03
USB1-214ENST00000568848 MUC3BQ9H195 1237 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 SYNDIG1Q9H7V2 258 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 POLR1BQ9H9Y6 1135 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 METTL14Q9HCE5 456 aaKnown RBP15.22■□□□□ 0.03
USB1-214ENST00000568848 PREBQ9HCU5 417 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 PLCB1Q9NQ66 1216 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 VPS51Q9UID3 782 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 AJAP1Q9UKB5 411 aaPredicted RBP15.22■□□□□ 0.03
USB1-214ENST00000568848 ITM2BQ9Y287 266 aa15.22■□□□□ 0.03
USB1-214ENST00000568848 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.21■□□□□ 0.03
USB1-214ENST00000568848 A0A1W2PQ27 194 aa15.21■□□□□ 0.03
USB1-214ENST00000568848 A0A1W2PQ64 194 aa15.21■□□□□ 0.03
USB1-214ENST00000568848 SCAMP1O15126 338 aa15.21■□□□□ 0.03
USB1-214ENST00000568848 ADCY5O95622 1261 aa15.21■□□□□ 0.03
USB1-214ENST00000568848 PAK4O96013 591 aaPredicted RBP15.21■□□□□ 0.03
USB1-214ENST00000568848 PNMA6AP0CW24 399 aaPredicted RBP15.21■□□□□ 0.03
USB1-214ENST00000568848 HNRNPA2B1P22626 353 aaKnown RBP15.21■□□□□ 0.03
USB1-214ENST00000568848 LSSP48449 732 aa15.21■□□□□ 0.03
USB1-214ENST00000568848 SULT2A1Q06520 285 aa15.21■□□□□ 0.03
USB1-214ENST00000568848 ZNF177Q13360 481 aaPredicted RBP15.21■□□□□ 0.03
USB1-214ENST00000568848 ISXQ2M1V0 245 aa15.21■□□□□ 0.03
USB1-214ENST00000568848 LRRC73Q5JTD7 316 aa15.21■□□□□ 0.03
USB1-214ENST00000568848 RABGAP1LQ5R372 815 aa15.21■□□□□ 0.03
USB1-214ENST00000568848 BROXQ5VW32 411 aa15.21■□□□□ 0.03
USB1-214ENST00000568848 DSG4Q86SJ6 1040 aa15.21■□□□□ 0.03
USB1-214ENST00000568848 FMR1NBQ8N0W7 255 aaPredicted RBP15.21■□□□□ 0.03
USB1-214ENST00000568848 CACTIN-AS1Q8N1I8 211 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms