RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 MAGED2Q9UNF1 606 aaPredicted RBP21.93■■□□□ 1.1
DENND4A-208ENST00000568515 PTPN3P26045 913 aa21.92■■□□□ 1.1
DENND4A-208ENST00000568515 PITX1P78337 314 aaPredicted RBP21.92■■□□□ 1.1
DENND4A-208ENST00000568515 NSUN2Q08J23 767 aaKnown RBP eCLIP21.92■■□□□ 1.1
DENND4A-208ENST00000568515 CNTD1Q8N815 330 aa21.92■■□□□ 1.1
DENND4A-208ENST00000568515 C1QTNF1Q9BXJ1 281 aa21.92■■□□□ 1.1
DENND4A-208ENST00000568515 SYNJ2BP-COX16A0A087WUM0 186 aa21.92■■□□□ 1.1
DENND4A-208ENST00000568515 TRPA1O75762 1119 aa21.92■■□□□ 1.1
DENND4A-208ENST00000568515 RNASEH2AO75792 299 aaKnown RBP21.92■■□□□ 1.1
DENND4A-208ENST00000568515 JUNP05412 331 aaKnown RBP21.92■■□□□ 1.1
DENND4A-208ENST00000568515 GRM5P41594 1212 aa21.92■■□□□ 1.1
DENND4A-208ENST00000568515 ADRM1Q16186 407 aa21.92■■□□□ 1.1
DENND4A-208ENST00000568515 ANO4Q32M45 955 aa21.92■■□□□ 1.1
DENND4A-208ENST00000568515 NOL9Q5SY16 702 aaKnown RBP21.92■■□□□ 1.1
DENND4A-208ENST00000568515 FAM149B1Q96BN6 582 aa21.92■■□□□ 1.1
DENND4A-208ENST00000568515 ZMAT2Q96NC0 199 aaKnown RBP21.92■■□□□ 1.1
DENND4A-208ENST00000568515 COX16Q9P0S2 106 aa21.92■■□□□ 1.1
DENND4A-208ENST00000568515 CNOT11Q9UKZ1 510 aaKnown RBP21.92■■□□□ 1.1
DENND4A-208ENST00000568515 ANKRD6Q9Y2G4 727 aa21.92■■□□□ 1.1
DENND4A-208ENST00000568515 GJA3Q9Y6H8 435 aa21.92■■□□□ 1.1
DENND4A-208ENST00000568515 DPYSQ14117 519 aa21.91■■□□□ 1.1
DENND4A-208ENST00000568515 GRM3Q14832 879 aa21.91■■□□□ 1.1
DENND4A-208ENST00000568515 MYBPC3Q14896 1274 aa21.91■■□□□ 1.1
DENND4A-208ENST00000568515 DCAF6Q58WW2 860 aa21.91■■□□□ 1.1
DENND4A-208ENST00000568515 OLFML2BQ68BL8 750 aa21.91■■□□□ 1.1
DENND4A-208ENST00000568515 LINC01465Q8N7H1 131 aa21.91■■□□□ 1.1
DENND4A-208ENST00000568515 TMA16Q96EY4 203 aaKnown RBP21.91■■□□□ 1.1
DENND4A-208ENST00000568515 SCYL1Q96KG9 808 aa21.91■■□□□ 1.1
DENND4A-208ENST00000568515 HSFY1Q96LI6 401 aa21.91■■□□□ 1.1
DENND4A-208ENST00000568515 NPAS2Q99743 824 aa21.91■■□□□ 1.1
DENND4A-208ENST00000568515 PDGFDQ9GZP0 370 aaPredicted RBP21.91■■□□□ 1.1
DENND4A-208ENST00000568515 LMCD1Q9NZU5 365 aa21.91■■□□□ 1.1
DENND4A-208ENST00000568515 PPP1R1BQ9UD71 204 aaPredicted RBP21.91■■□□□ 1.1
DENND4A-208ENST00000568515 TCAF2A6NFQ2 919 aa21.91■■□□□ 1.1
DENND4A-208ENST00000568515 TXNP10599 105 aaKnown RBP21.91■■□□□ 1.1
DENND4A-208ENST00000568515 TCN1P20061 433 aaPredicted RBP21.91■■□□□ 1.1
DENND4A-208ENST00000568515 CSRP3P50461 194 aa21.91■■□□□ 1.1
DENND4A-208ENST00000568515 OTUD1Q5VV17 481 aaPredicted RBP21.91■■□□□ 1.1
DENND4A-208ENST00000568515 KLC3Q6P597 504 aa21.91■■□□□ 1.1
DENND4A-208ENST00000568515 AMIGO2Q86SJ2 522 aa21.91■■□□□ 1.1
DENND4A-208ENST00000568515 LSMEM2Q8N112 164 aa21.91■■□□□ 1.1
DENND4A-208ENST00000568515 NLRP7Q8WX94 980 aa21.91■■□□□ 1.1
DENND4A-208ENST00000568515 TSNARE1Q96NA8 513 aa21.91■■□□□ 1.1
DENND4A-208ENST00000568515 TIMMDC1Q9NPL8 285 aa21.91■■□□□ 1.1
DENND4A-208ENST00000568515 CHRAC1Q9NRG0 131 aa21.91■■□□□ 1.1
DENND4A-208ENST00000568515 TUBGCP4Q9UGJ1 667 aa21.91■■□□□ 1.1
DENND4A-208ENST00000568515 COPG1Q9Y678 874 aaKnown RBP21.91■■□□□ 1.1
DENND4A-208ENST00000568515 H3BSA7 217 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 CDK4P11802 303 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 ZNF26P17031 533 aaPredicted RBP21.9■■□□□ 1.1
DENND4A-208ENST00000568515 PCSK6P29122 969 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 SLC5A2P31639 672 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 HADHAP40939 763 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 GPR22Q99680 433 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 SETD4Q9NVD3 440 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 THEGQ9P2T0 379 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 MAGEB16A2A368 324 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 EEF2KO00418 725 aaKnown RBP21.9■■□□□ 1.1
DENND4A-208ENST00000568515 DCLK1O15075 740 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 DDHD2O94830 711 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 VAPBO95292 243 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 PSMC3P17980 439 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 SAT1P21673 171 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 GLRBP48167 497 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 KIZQ2M2Z5 673 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 MGAT5BQ3V5L5 792 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 KCTD11Q693B1 232 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 FAM156AQ8NDB6 213 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 IRGQQ8WZA9 623 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 CIDEBQ9UHD4 219 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 RUVBL2Q9Y230 463 aaKnown RBP21.9■■□□□ 1.1
DENND4A-208ENST00000568515 CEPT1Q9Y6K0 416 aa21.9■■□□□ 1.1
DENND4A-208ENST00000568515 GOLGA8TH3BQL2 631 aa21.89■■□□□ 1.1
DENND4A-208ENST00000568515 TRIM38O00635 465 aa21.89■■□□□ 1.1
DENND4A-208ENST00000568515 ZBTB24O43167 697 aaPredicted RBP21.89■■□□□ 1.1
DENND4A-208ENST00000568515 LMO2P25791 158 aa21.89■■□□□ 1.1
DENND4A-208ENST00000568515 PGGT1BP53609 377 aa21.89■■□□□ 1.1
DENND4A-208ENST00000568515 IL23RQ5VWK5 629 aa21.89■■□□□ 1.1
DENND4A-208ENST00000568515 CRYBG2Q8N1P7 616 aa21.89■■□□□ 1.1
DENND4A-208ENST00000568515 LRRC52Q8N7C0 313 aa21.89■■□□□ 1.1
DENND4A-208ENST00000568515 STYXQ8WUJ0 223 aa21.89■■□□□ 1.1
DENND4A-208ENST00000568515 ZSWIM8A7E2V4 1837 aa21.89■■□□□ 1.09
DENND4A-208ENST00000568515 WDR90Q96KV7 1748 aa21.89■■□□□ 1.09
DENND4A-208ENST00000568515 PHGDHO43175 533 aaKnown RBP21.89■■□□□ 1.09
DENND4A-208ENST00000568515 CYP2B6P20813 491 aa21.89■■□□□ 1.09
DENND4A-208ENST00000568515 NPY2RP49146 381 aa21.89■■□□□ 1.09
DENND4A-208ENST00000568515 PTK2BQ14289 1009 aa21.89■■□□□ 1.09
DENND4A-208ENST00000568515 APOBEC3FQ8IUX4 373 aaKnown RBP21.89■■□□□ 1.09
DENND4A-208ENST00000568515 SLC2A14Q8TDB8 520 aa21.89■■□□□ 1.09
DENND4A-208ENST00000568515 KCTD4Q8WVF5 259 aa21.89■■□□□ 1.09
DENND4A-208ENST00000568515 EME1Q96AY2 570 aa21.89■■□□□ 1.09
DENND4A-208ENST00000568515 C18orf25Q96B23 403 aaPredicted RBP21.89■■□□□ 1.09
DENND4A-208ENST00000568515 APOL2Q9BQE5 337 aa21.89■■□□□ 1.09
DENND4A-208ENST00000568515 EPS15L1Q9UBC2 864 aa21.89■■□□□ 1.09
DENND4A-208ENST00000568515 DERAQ9Y315 318 aa21.89■■□□□ 1.09
DENND4A-208ENST00000568515 AK5Q9Y6K8 562 aa21.89■■□□□ 1.09
DENND4A-208ENST00000568515 TRMUO75648 421 aaKnown RBP21.88■■□□□ 1.09
DENND4A-208ENST00000568515 CDH2P19022 906 aaPredicted RBP21.88■■□□□ 1.09
DENND4A-208ENST00000568515 USP10Q14694 798 aaKnown RBP21.88■■□□□ 1.09
DENND4A-208ENST00000568515 ZC3HC1Q86WB0 502 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms