RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 MID1O15344 667 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 CBFA2T2O43439 604 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 SMAD6O43541 496 aaKnown RBP8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 LATO43561 262 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 KDELR3O43731 214 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 SEMA4FO95754 770 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 IGHV4-34P06331 123 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 TPM3P06753 285 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 VAV1P15498 845 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 CASP14P31944 242 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 SLC8A1P32418 973 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 CCR5P51681 352 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 YBEYP58557 167 aaPredicted RBP8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 TTC31Q49AM3 519 aaPredicted RBP8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 AASDHQ4L235 1098 aaPredicted RBP8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 TRIM61Q5EBN2 209 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 DCAF12L1Q5VU92 463 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 FAM46CQ5VWP2 391 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 AFMIDQ63HM1 303 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 ALKBH5Q6P6C2 394 aaKnown RBP8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 DBX2Q6ZNG2 339 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 TFAP2DQ7Z6R9 452 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 DNAAF5Q86Y56 855 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 MMAAQ8IVH4 418 aaKnown RBP8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 VSTM4Q8IW00 320 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 PYROXD2Q8N2H3 581 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 DEFB119Q8N690 84 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 RTL3Q8N8U3 475 aaKnown RBP8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 OR7D4Q8NG98 312 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 OR8K1Q8NGG5 319 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 OR2A12Q8NGT7 310 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 FAM71BQ8TC56 605 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 OR8D1Q8WZ84 308 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 BIRC7Q96CA5 298 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 ERLEC1Q96DZ1 483 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 PEBP4Q96S96 227 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 NUSAP1Q9BXS6 441 aaKnown RBP8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 TRIM7Q9C029 511 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 ZDHHC5Q9C0B5 715 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 KLC2Q9H0B6 622 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 MUC3BQ9H195 1237 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 SMOC1Q9H4F8 434 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 C6orf106Q9H6K1 298 aaPredicted RBP8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 LRRC19Q9H756 370 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 DNAAF2Q9NVR5 837 aaKnown RBP8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 FBXL12Q9NXK8 326 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 SERGEFQ9UGK8 458 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 SUSD2Q9UGT4 822 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 SARDHQ9UL12 918 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 NCKAP1Q9Y2A7 1128 aa8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 TDRD6O60522 2096 aaKnown RBP8.37□□□□□ -1.07
HDGFL3-205ENST00000568129 ZSCAN5CA6NGD5 496 aaPredicted RBP8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 K7ERQ8 282 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 ARHGAP33O14559 1287 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 FGF10O15520 208 aaPredicted RBP8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 ATMINO43313 823 aaPredicted RBP8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 PLRG1O43660 514 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 LRCH4O75427 683 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 CTSLP07711 333 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 ZNF883P0CG24 379 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 GNSP15586 552 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 ENGP17813 658 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 GLDCP23378 1020 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 PSMA2P25787 234 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 CD27P26842 260 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 MIPP30301 263 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 ACVRL1P37023 503 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 SERPINH1P50454 418 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 NDST2P52849 883 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 GEMIN4P57678 1058 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 BNC1Q01954 994 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 SLC14A1Q13336 389 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 PIGHQ14442 188 aaPredicted RBP8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 TCEAL1Q15170 157 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 SLC18A3Q16572 532 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 BOLA3Q53S33 107 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 INO80DQ53TQ3 878 aaPredicted RBP8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 EFHC2Q5JST6 749 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 KIAA0895LQ68EN5 471 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 RETSATQ6NUM9 610 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 ARMCX6Q7L4S7 300 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 DSG4Q86SJ6 1040 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 PIP4P1Q86T03 277 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 VPS36Q86VN1 386 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 PCDH20Q8N6Y1 951 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 OR2T34Q8NGX1 318 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 CPLX3Q8WVH0 158 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 CASKIN2Q8WXE0 1202 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 LRIG1Q96JA1 1093 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 EDEM2Q9BV94 578 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 HDAC8Q9BY41 377 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 THAP2Q9H0W7 228 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 CATSPERBQ9H7T0 1116 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 EBF2Q9HAK2 575 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 TMEM9BQ9NQ34 198 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 DONSONQ9NYP3 566 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 MFHAS1Q9Y4C4 1052 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 SPTBN2O15020 2390 aa8.36□□□□□ -1.07
HDGFL3-205ENST00000568129 PTPRBP23467 1997 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 A0A1W2PP55 124 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms